CAPSD_SBMVA
ID CAPSD_SBMVA Reviewed; 266 AA.
AC O72158;
DT 30-NOV-2010, integrated into UniProtKB/Swiss-Prot.
DT 01-AUG-1998, sequence version 1.
DT 23-FEB-2022, entry version 63.
DE RecName: Full=Capsid protein;
DE Short=CP;
DE AltName: Full=Coat protein;
GN ORFNames=ORF3;
OS Southern bean mosaic virus (isolate Bean/United States/Arkansas) (SBMV).
OC Viruses; Riboviria; Orthornavirae; Pisuviricota; Pisoniviricetes;
OC Sobelivirales; Solemoviridae; Sobemovirus.
OX NCBI_TaxID=652938;
OH NCBI_TaxID=3847; Glycine max (Soybean) (Glycine hispida).
OH NCBI_TaxID=3885; Phaseolus vulgaris (Kidney bean) (French bean).
OH NCBI_TaxID=3915; Vigna mungo (Black gram) (Phaseolus mungo).
OH NCBI_TaxID=3917; Vigna unguiculata (Cowpea).
RN [1]
RP NUCLEOTIDE SEQUENCE [GENOMIC RNA].
RX PubMed=9856101; DOI=10.1007/s007050050451;
RA Lee L., Anderson E.J.;
RT "Nucleotide sequence of a resistance breaking mutant of southern bean
RT mosaic virus.";
RL Arch. Virol. 143:2189-2201(1998).
CC -!- FUNCTION: Capsid protein self-assembles to form an icosahedral capsid
CC with a T=3 symmetry, about 30 nm in diameter, and consisting of 180
CC capsid proteins. Each icosahedral unit contains three protein subunits
CC (Potential). {ECO:0000305}.
CC -!- SUBCELLULAR LOCATION: Virion {ECO:0000305}.
CC -!- SIMILARITY: Belongs to the icosahedral plant coat protein family.
CC {ECO:0000305}.
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DR EMBL; AF055887; AAC15985.1; -; Genomic_RNA.
DR SMR; O72158; -.
DR Proteomes; UP000001671; Genome.
DR GO; GO:0039617; C:T=3 icosahedral viral capsid; IEA:UniProtKB-KW.
DR GO; GO:0003723; F:RNA binding; IEA:UniProtKB-KW.
DR GO; GO:0005198; F:structural molecule activity; IEA:InterPro.
DR Gene3D; 2.60.120.20; -; 1.
DR InterPro; IPR000937; Capsid_prot_S-dom_vir.
DR InterPro; IPR029053; Viral_coat.
DR Pfam; PF00729; Viral_coat; 1.
DR PRINTS; PR00233; ICOSAHEDRAL.
DR PROSITE; PS00555; ICOSAH_VIR_COAT_S; 1.
PE 3: Inferred from homology;
KW Capsid protein; Disulfide bond; Reference proteome; RNA-binding;
KW T=3 icosahedral capsid protein; Virion.
FT CHAIN 1..266
FT /note="Capsid protein"
FT /id="PRO_0000402467"
FT REGION 2..71
FT /note="R domain, interaction with RNA"
FT /evidence="ECO:0000250"
FT REGION 13..51
FT /note="Disordered"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT REGION 72..257
FT /note="S domain, virion shell"
FT /evidence="ECO:0000250"
FT REGION 258..266
FT /note="P domain, projecting"
FT /evidence="ECO:0000250"
FT DISULFID 175..182
FT /evidence="ECO:0000250"
SQ SEQUENCE 266 AA; 28771 MW; 18B1AA51E7E8A32B CRC64;
MAKRLTKQQL TKAIANTLEA PATQSRRPRN RRRRRSAARQ PQSTQAGVSM APIAQGTMVR
LREPSLRTAG GVTVLTHSEL STELSVTNAI VITSELVMPY TMGTWLRGVA ANWSKYSLLS
VRYTYLPSCP STTSGSIHMG FQYDMADTLP VSVNQLSNLR GYVSGQVWSG SSGLCYINGT
RCLDTANAIT TTLDVGQLGK KWYPFKTSTD FTTAVGVNVN IATPLVPARL IIAMLDGSSS
TAVSTGRLYV SYTIQLIEPT ALALNN