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CAPSD_SFAVA
ID   CAPSD_SFAVA             Reviewed;         461 AA.
AC   Q8JJY5; Q0E560; Q917M0;
DT   29-APR-2008, integrated into UniProtKB/Swiss-Prot.
DT   01-OCT-2002, sequence version 1.
DT   23-FEB-2022, entry version 62.
DE   RecName: Full=Major capsid protein;
GN   Name=MCP; ORFNames=ORF041;
OS   Spodoptera frugiperda ascovirus 1a (SfAV-1a).
OC   Viruses; Varidnaviria; Bamfordvirae; Nucleocytoviricota; Megaviricetes;
OC   Pimascovirales; Ascoviridae; Ascovirus.
OX   NCBI_TaxID=113370;
OH   NCBI_TaxID=7108; Spodoptera frugiperda (Fall armyworm).
RN   [1]
RP   NUCLEOTIDE SEQUENCE [GENOMIC DNA].
RX   PubMed=14573805; DOI=10.1099/vir.0.19290-0;
RA   Stasiak K., Renault S., Demattei M.V., Bigot Y., Federici B.A.;
RT   "Evidence for the evolution of ascoviruses from iridoviruses.";
RL   J. Gen. Virol. 84:2999-3009(2003).
RN   [2]
RP   NUCLEOTIDE SEQUENCE [GENOMIC DNA].
RX   PubMed=16040049; DOI=10.1016/j.jip.2005.06.011;
RA   Cheng X.W., Wang L., Carner G.R., Arif B.M.;
RT   "Characterization of three ascovirus isolates from cotton insects.";
RL   J. Invertebr. Pathol. 89:193-202(2005).
RN   [3]
RP   NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RX   PubMed=16987980; DOI=10.1128/jvi.01639-06;
RA   Bideshi D.K., Demattei M.V., Rouleux-Bonnin F., Stasiak K., Tan Y.,
RA   Bigot S., Bigot Y., Federici B.A.;
RT   "Genomic sequence of Spodoptera frugiperda Ascovirus 1a, an enveloped,
RT   double-stranded DNA insect virus that manipulates apoptosis for viral
RT   reproduction.";
RL   J. Virol. 80:11791-11805(2006).
CC   -!- FUNCTION: Major protein of the capsid. {ECO:0000250}.
CC   -!- SUBCELLULAR LOCATION: Virion {ECO:0000250}.
CC   -!- SEQUENCE CAUTION:
CC       Sequence=AAL16645.1; Type=Frameshift; Evidence={ECO:0000305};
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DR   EMBL; AJ312690; CAC84465.1; -; Genomic_DNA.
DR   EMBL; AF419097; AAL16645.1; ALT_SEQ; Genomic_DNA.
DR   EMBL; AM398843; CAL44641.1; -; Genomic_DNA.
DR   RefSeq; YP_762396.1; NC_008361.1.
DR   SMR; Q8JJY5; -.
DR   PRIDE; Q8JJY5; -.
DR   GeneID; 4306162; -.
DR   KEGG; vg:4306162; -.
DR   Proteomes; UP000008030; Genome.
DR   GO; GO:0019028; C:viral capsid; IEA:UniProtKB-KW.
DR   GO; GO:0005198; F:structural molecule activity; IEA:InterPro.
DR   Gene3D; 2.70.9.20; -; 1.
DR   InterPro; IPR031654; Capsid_N.
DR   InterPro; IPR007542; MCP_C.
DR   InterPro; IPR038519; MCP_C_sf.
DR   InterPro; IPR016112; VP_dsDNA_II.
DR   Pfam; PF16903; Capsid_N; 1.
DR   Pfam; PF04451; Capsid_NCLDV; 1.
DR   SUPFAM; SSF49749; SSF49749; 2.
PE   3: Inferred from homology;
KW   Capsid protein; Reference proteome; Virion.
FT   CHAIN           1..461
FT                   /note="Major capsid protein"
FT                   /id="PRO_0000330591"
FT   REGION          1..22
FT                   /note="Disordered"
FT                   /evidence="ECO:0000256|SAM:MobiDB-lite"
FT   COMPBIAS        1..19
FT                   /note="Polar residues"
FT                   /evidence="ECO:0000256|SAM:MobiDB-lite"
FT   CONFLICT        112
FT                   /note="L -> V (in Ref. 2; AAL16645)"
FT                   /evidence="ECO:0000305"
FT   CONFLICT        157..162
FT                   /note="Missing (in Ref. 2; AAL16645)"
FT                   /evidence="ECO:0000305"
SQ   SEQUENCE   461 AA;  50854 MW;  8802CE60BB1D9F01 CRC64;
     MSTPTISADT TAQNATSTEV REDVNKRGNI DNYIYGPDER VTTYFVREIR PCAAFSKLPV
     LLTNGNGMKK FGGTFTMPIN ASGDYLLSLT AYATLSAGTI TGAGDASVVS WLPKLGHKLI
     KSVKLKIDGK PLVELSSSFM DMWSEFMIDS GNYEAYNNMV GGEYEFNKDR INNKSVVLPI
     PMYFSRDTGI ALPIGAMVNN RVTVEFVFRK VTDLLVLENK PATGAGTGVV RTLTEADFSV
     VPTIASFEVV ADFAVVTDFE IDRTSCTPHY MYMEKPVDVP ATELVKPTDG TTAPDTMSFE
     IEHTNGIVKA LFFGVRNITR PEYLDFYKVG LPRFNLGARE DVGTATVSRI GIKCNDKYRV
     PLLPSEHFVY TEPYHAAKRV PTTNNGLYMY SFALDLHTID PKGSINPSNF NSNISVVLRP
     SETLNAATTE RFEFNATVLT GYILYVENGN LRKIDNGGDF N
 
 
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