ID   CAPSD_SMYEA             Reviewed;         242 AA.
AC   P28899; Q88467;
DT   01-DEC-1992, integrated into UniProtKB/Swiss-Prot.
DT   01-DEC-1992, sequence version 1.
DT   23-FEB-2022, entry version 78.
DE   RecName: Full=Coat protein;
DE   AltName: Full=Capsid protein;
DE            Short=CP;
OS   Strawberry mild yellow edge-associated virus (SMYEaV).
OC   Viruses; Riboviria; Orthornavirae; Kitrinoviricota; Alsuviricetes;
OC   Tymovirales; Alphaflexiviridae; Potexvirus.
OX   NCBI_TaxID=12187;
OH   NCBI_TaxID=63459; Chenopodium quinoa (Quinoa).
OH   NCBI_TaxID=57918; Fragaria vesca (Woodland strawberry) (Potentilla vesca).
OH   NCBI_TaxID=59498; Rubus rosifolius.
RN   [1]
RP   NUCLEOTIDE SEQUENCE [GENOMIC RNA].
RC   STRAIN=MY-18;
RX   PubMed=1339469; DOI=10.1099/0022-1317-73-2-475;
RA   Jelkmann W., Maiss E., Martin R.R.;
RT   "The nucleotide sequence and genome organization of strawberry mild yellow
RT   edge-associated potexvirus.";
RL   J. Gen. Virol. 73:475-479(1992).
RN   [2]
RP   NUCLEOTIDE SEQUENCE [GENOMIC RNA].
RC   STRAIN=MY-18;
RX   PubMed=2191082; DOI=10.1099/0022-1317-71-6-1251;
RA   Jelkmann W., Martin R.R., Lesemann D.E., Vetten J.H., Skelton F.;
RT   "A new potexvirus associated with strawberry mild yellow edge disease.";
RL   J. Gen. Virol. 71:1251-1258(1990).
RN   [3]
RP   REVIEW.
RX   PubMed=15828680; DOI=10.1094/mpmi-18-0283;
RA   Verchot-Lubicz J.;
RT   "A new cell-to-cell transport model for Potexviruses.";
RL   Mol. Plant Microbe Interact. 18:283-290(2005).
CC   -!- FUNCTION: Required for genome encapsidation. Forms ribonucleoprotein
CC       complexes along with TGB1 helicase and viral RNA.
CC   -!- SUBCELLULAR LOCATION: Virion {ECO:0000305}.
CC   -!- SIMILARITY: Belongs to the potexvirus capsid protein family.
CC       {ECO:0000305}.
CC   -!- CAUTION: It is uncertain whether Met-1 or Met-20 is the initiator.
CC       {ECO:0000305}.
CC   -!- SEQUENCE CAUTION:
CC       Sequence=BAA02079.1; Type=Erroneous initiation; Evidence={ECO:0000305};
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DR   EMBL; D12517; BAA02086.1; -; Genomic_RNA.
DR   EMBL; D12515; BAA02078.1; -; Genomic_RNA.
DR   EMBL; D12515; BAA02079.1; ALT_INIT; Genomic_RNA.
DR   PIR; JQ1430; VCWGSM.
DR   RefSeq; NP_620646.1; NC_003794.1.
DR   SMR; P28899; -.
DR   GeneID; 944375; -.
DR   KEGG; vg:944375; -.
DR   Proteomes; UP000007225; Genome.
DR   GO; GO:0019029; C:helical viral capsid; IEA:UniProtKB-KW.
DR   GO; GO:0005198; F:structural molecule activity; IEA:InterPro.
DR   InterPro; IPR000052; Pltvir_coat.
DR   Pfam; PF00286; Flexi_CP; 1.
DR   PRINTS; PR00232; POTXCARLCOAT.
DR   PROSITE; PS00418; POTEX_CARLAVIRUS_COAT; 1.
PE   3: Inferred from homology;
KW   Capsid protein; Helical capsid protein; Reference proteome;
KW   Ribonucleoprotein; Virion.
FT   CHAIN           1..242
FT                   /note="Coat protein"
FT                   /id="PRO_0000222631"
FT   REGION          1..41
FT                   /note="Disordered"
FT                   /evidence="ECO:0000256|SAM:MobiDB-lite"
FT   REGION          219..242
FT                   /note="Disordered"
FT                   /evidence="ECO:0000256|SAM:MobiDB-lite"
FT   COMPBIAS        1..31
FT                   /note="Pro residues"
FT                   /evidence="ECO:0000256|SAM:MobiDB-lite"
SQ   SEQUENCE   242 AA;  25743 MW;  46C0703B51E16F08 CRC64;
     MGDQPRPPVP PAPGSNPLPM GSTPPVLPGR TPNPNANVAN QVGDPFRVLT PEELAAPISA
     ASNKVATREQ ILGIVADLNA LGFVGDPALG LFDLAFHCYD IGSSPSAQPV GPSPFGCSRM
     QVAAVVRNHC TLRQLCMFYA PSVWNKAVRD NRPPGNWSNL QFTPETKFAA FDFFDGVLNP
     ASQEVPLWRQ PTPQEIYASA THKDVATYRA ASKAHDRISN STLLTKGASR STPPALLPGP
     DA