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CAPSD_TBSVC
ID   CAPSD_TBSVC             Reviewed;         388 AA.
AC   P11689;
DT   01-OCT-1989, integrated into UniProtKB/Swiss-Prot.
DT   01-OCT-1989, sequence version 1.
DT   23-FEB-2022, entry version 85.
DE   RecName: Full=Capsid protein;
DE   AltName: Full=Coat protein;
DE   AltName: Full=p41;
GN   ORFNames=ORF2;
OS   Tomato bushy stunt virus (strain Cherry) (TBSV).
OC   Viruses; Riboviria; Orthornavirae; Kitrinoviricota; Tolucaviricetes;
OC   Tolivirales; Tombusviridae; Procedovirinae; Tombusvirus.
OX   NCBI_TaxID=12147;
OH   NCBI_TaxID=4072; Capsicum annuum (Capsicum pepper).
OH   NCBI_TaxID=3749; Malus.
OH   NCBI_TaxID=3766; Pyrus (pears).
OH   NCBI_TaxID=4081; Solanum lycopersicum (Tomato) (Lycopersicon esculentum).
OH   NCBI_TaxID=4111; Solanum melongena (Eggplant) (Aubergine).
OH   NCBI_TaxID=29777; Tolmiea menziesii.
OH   NCBI_TaxID=13305; Tulipa.
RN   [1]
RP   NUCLEOTIDE SEQUENCE [GENOMIC RNA].
RX   PubMed=2922927; DOI=10.1016/0042-6822(89)90039-1;
RA   Hillman B.I., Hearne P.Q., Rochon D., Morris T.J.;
RT   "Organization of tomato bushy stunt virus genome: characterization of the
RT   coat protein gene and the 3' terminus.";
RL   Virology 169:42-50(1989).
RN   [2]
RP   NUCLEOTIDE SEQUENCE [GENOMIC RNA].
RX   PubMed=2353450; DOI=10.1016/0042-6822(90)90468-7;
RA   Hearne P.Q., Knorr D.A., Hillman B.I., Morris T.J.;
RT   "The complete genome structure and synthesis of infectious RNA from clones
RT   of tomato bushy stunt virus.";
RL   Virology 177:141-151(1990).
CC   -!- FUNCTION: Capsid protein self-assembles to form an icosahedral capsid
CC       with a T=3 symmetry, about 32-35 nm in diameter, and consisting of 180
CC       capsid proteins.
CC   -!- SUBUNIT: Homomultimer. {ECO:0000305}.
CC   -!- SUBCELLULAR LOCATION: Virion {ECO:0000305}.
CC   -!- SIMILARITY: Belongs to the icosahedral plant coat protein family.
CC       {ECO:0000305}.
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DR   EMBL; M21958; AAB02536.1; -; Genomic_RNA.
DR   PIR; JA0114; VCVGTB.
DR   RefSeq; NP_062899.1; NC_001554.1.
DR   SMR; P11689; -.
DR   GeneID; 1493953; -.
DR   KEGG; vg:1493953; -.
DR   Proteomes; UP000001666; Genome.
DR   GO; GO:0039617; C:T=3 icosahedral viral capsid; IEA:UniProtKB-KW.
DR   GO; GO:0003723; F:RNA binding; IEA:UniProtKB-KW.
DR   GO; GO:0005198; F:structural molecule activity; IEA:InterPro.
DR   Gene3D; 2.60.120.20; -; 1.
DR   InterPro; IPR000937; Capsid_prot_S-dom_vir.
DR   InterPro; IPR029053; Viral_coat.
DR   Pfam; PF00729; Viral_coat; 1.
DR   PRINTS; PR00233; ICOSAHEDRAL.
DR   PROSITE; PS00555; ICOSAH_VIR_COAT_S; 1.
PE   3: Inferred from homology;
KW   Capsid protein; Reference proteome; RNA-binding;
KW   T=3 icosahedral capsid protein; Virion.
FT   CHAIN           1..388
FT                   /note="Capsid protein"
FT                   /id="PRO_0000222867"
FT   REGION          1..102
FT                   /note="R domain, interaction with RNA"
FT   REGION          56..61
FT                   /note="Involved in encapsidation"
FT                   /evidence="ECO:0000250"
FT   REGION          103..264
FT                   /note="S domain, virion shell"
FT   REGION          265..388
FT                   /note="P domain, projecting"
SQ   SEQUENCE   388 AA;  41151 MW;  55C94E5C3C445A69 CRC64;
     MAMVKRNNNT GMIPVSTKQL LALGAAAGAT ALQGFVKNNG MAIVEGAVDL TKRAYKAVRR
     RGGKKQQMIN HVGGTGGAIM APVAVTRQLV GSKPKFTGRT SGSVTVTHRE YLSQVNNSTG
     FQVNGGIVGN LLQLNPLNGT LFSWLPAIAS NFDQYTFNSV VLHYVPLCST TEVGRVAIYF
     DKDSEDPEPA DRVELANYSV LKETAPWAEA MLRVPTDKIK RFCDDSSTSD HKLIDLGQLG
     IATYGGAGTN AVGDIFISYS VTLYFPQPTN TLLSTRRLDL AGALVTASGP GYLLVSRTAT
     VLTMTFRATG TFVISGTYRC LTATTLGLAG GVNVNSITVV DNIGTDSAFF INCTVSNLPS
     VVTFTSTGIT SATVHCVRAT RQNDVSLI
 
 
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