CAPSD_TBSVC
ID CAPSD_TBSVC Reviewed; 388 AA.
AC P11689;
DT 01-OCT-1989, integrated into UniProtKB/Swiss-Prot.
DT 01-OCT-1989, sequence version 1.
DT 23-FEB-2022, entry version 85.
DE RecName: Full=Capsid protein;
DE AltName: Full=Coat protein;
DE AltName: Full=p41;
GN ORFNames=ORF2;
OS Tomato bushy stunt virus (strain Cherry) (TBSV).
OC Viruses; Riboviria; Orthornavirae; Kitrinoviricota; Tolucaviricetes;
OC Tolivirales; Tombusviridae; Procedovirinae; Tombusvirus.
OX NCBI_TaxID=12147;
OH NCBI_TaxID=4072; Capsicum annuum (Capsicum pepper).
OH NCBI_TaxID=3749; Malus.
OH NCBI_TaxID=3766; Pyrus (pears).
OH NCBI_TaxID=4081; Solanum lycopersicum (Tomato) (Lycopersicon esculentum).
OH NCBI_TaxID=4111; Solanum melongena (Eggplant) (Aubergine).
OH NCBI_TaxID=29777; Tolmiea menziesii.
OH NCBI_TaxID=13305; Tulipa.
RN [1]
RP NUCLEOTIDE SEQUENCE [GENOMIC RNA].
RX PubMed=2922927; DOI=10.1016/0042-6822(89)90039-1;
RA Hillman B.I., Hearne P.Q., Rochon D., Morris T.J.;
RT "Organization of tomato bushy stunt virus genome: characterization of the
RT coat protein gene and the 3' terminus.";
RL Virology 169:42-50(1989).
RN [2]
RP NUCLEOTIDE SEQUENCE [GENOMIC RNA].
RX PubMed=2353450; DOI=10.1016/0042-6822(90)90468-7;
RA Hearne P.Q., Knorr D.A., Hillman B.I., Morris T.J.;
RT "The complete genome structure and synthesis of infectious RNA from clones
RT of tomato bushy stunt virus.";
RL Virology 177:141-151(1990).
CC -!- FUNCTION: Capsid protein self-assembles to form an icosahedral capsid
CC with a T=3 symmetry, about 32-35 nm in diameter, and consisting of 180
CC capsid proteins.
CC -!- SUBUNIT: Homomultimer. {ECO:0000305}.
CC -!- SUBCELLULAR LOCATION: Virion {ECO:0000305}.
CC -!- SIMILARITY: Belongs to the icosahedral plant coat protein family.
CC {ECO:0000305}.
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DR EMBL; M21958; AAB02536.1; -; Genomic_RNA.
DR PIR; JA0114; VCVGTB.
DR RefSeq; NP_062899.1; NC_001554.1.
DR SMR; P11689; -.
DR GeneID; 1493953; -.
DR KEGG; vg:1493953; -.
DR Proteomes; UP000001666; Genome.
DR GO; GO:0039617; C:T=3 icosahedral viral capsid; IEA:UniProtKB-KW.
DR GO; GO:0003723; F:RNA binding; IEA:UniProtKB-KW.
DR GO; GO:0005198; F:structural molecule activity; IEA:InterPro.
DR Gene3D; 2.60.120.20; -; 1.
DR InterPro; IPR000937; Capsid_prot_S-dom_vir.
DR InterPro; IPR029053; Viral_coat.
DR Pfam; PF00729; Viral_coat; 1.
DR PRINTS; PR00233; ICOSAHEDRAL.
DR PROSITE; PS00555; ICOSAH_VIR_COAT_S; 1.
PE 3: Inferred from homology;
KW Capsid protein; Reference proteome; RNA-binding;
KW T=3 icosahedral capsid protein; Virion.
FT CHAIN 1..388
FT /note="Capsid protein"
FT /id="PRO_0000222867"
FT REGION 1..102
FT /note="R domain, interaction with RNA"
FT REGION 56..61
FT /note="Involved in encapsidation"
FT /evidence="ECO:0000250"
FT REGION 103..264
FT /note="S domain, virion shell"
FT REGION 265..388
FT /note="P domain, projecting"
SQ SEQUENCE 388 AA; 41151 MW; 55C94E5C3C445A69 CRC64;
MAMVKRNNNT GMIPVSTKQL LALGAAAGAT ALQGFVKNNG MAIVEGAVDL TKRAYKAVRR
RGGKKQQMIN HVGGTGGAIM APVAVTRQLV GSKPKFTGRT SGSVTVTHRE YLSQVNNSTG
FQVNGGIVGN LLQLNPLNGT LFSWLPAIAS NFDQYTFNSV VLHYVPLCST TEVGRVAIYF
DKDSEDPEPA DRVELANYSV LKETAPWAEA MLRVPTDKIK RFCDDSSTSD HKLIDLGQLG
IATYGGAGTN AVGDIFISYS VTLYFPQPTN TLLSTRRLDL AGALVTASGP GYLLVSRTAT
VLTMTFRATG TFVISGTYRC LTATTLGLAG GVNVNSITVV DNIGTDSAFF INCTVSNLPS
VVTFTSTGIT SATVHCVRAT RQNDVSLI