CAPSD_TOBSV
ID CAPSD_TOBSV Reviewed; 237 AA.
AC P03598;
DT 21-JUL-1986, integrated into UniProtKB/Swiss-Prot.
DT 21-JUL-1986, sequence version 1.
DT 02-JUN-2021, entry version 59.
DE RecName: Full=Capsid protein;
DE Short=CP;
DE AltName: Full=Coat protein;
GN ORFNames=ORF3b;
OS Tobacco streak virus (strain WC) (TSV).
OC Viruses; Riboviria; Orthornavirae; Kitrinoviricota; Alsuviricetes;
OC Martellivirales; Bromoviridae; Ilarvirus.
OX NCBI_TaxID=12318;
OH NCBI_TaxID=4686; Asparagus officinalis (Garden asparagus).
OH NCBI_TaxID=41562; Dahlia.
OH NCBI_TaxID=3847; Glycine max (Soybean) (Glycine hispida).
OH NCBI_TaxID=34274; Gossypium herbaceum (Levant cotton) (Arabian cotton).
OH NCBI_TaxID=47082; Melilotus albus (White sweet clover) (Melilotus officinalis subsp. albus).
OH NCBI_TaxID=4097; Nicotiana tabacum (Common tobacco).
OH NCBI_TaxID=3885; Phaseolus vulgaris (Kidney bean) (French bean).
OH NCBI_TaxID=137000; Rosa setigera.
OH NCBI_TaxID=57577; Trifolium pratense (Red clover).
RN [1]
RP NUCLEOTIDE SEQUENCE [GENOMIC RNA].
RX PubMed=6546793; DOI=10.1093/nar/12.5.2427;
RA Cornelissen B.J.C., Janssen H., Zuidema D., Bol J.F.;
RT "Complete nucleotide sequence of tobacco streak virus RNA 3.";
RL Nucleic Acids Res. 12:2427-2437(1984).
CC -!- FUNCTION: Capsid protein self-assembles to form an icosahedral capsid
CC with a T=3 symmetry, about 29 nm in diameter, and consisting of 12
CC capsid protein pentamers and 20 capsid protein hexamers. Binds to the
CC to the 3' end of the nonpolyadenylated viral RNA and is involved in
CC viral RNA translation initiation. Probably binds RNA and plays a role
CC in packaging (By similarity). {ECO:0000250}.
CC -!- SUBCELLULAR LOCATION: Virion {ECO:0000305}.
CC -!- SIMILARITY: Belongs to the alphamovirus/ilarvirus capsid protein
CC family. {ECO:0000305}.
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DR EMBL; X00435; CAA25133.1; -; Genomic_RNA.
DR PIR; A04206; VCBVWC.
DR RefSeq; NP_620774.1; NC_003845.1.
DR SMR; P03598; -.
DR GeneID; 962660; -.
DR KEGG; vg:962660; -.
DR Proteomes; UP000007795; Genome.
DR GO; GO:0039617; C:T=3 icosahedral viral capsid; IEA:UniProtKB-KW.
DR GO; GO:0019013; C:viral nucleocapsid; IEA:UniProtKB-KW.
DR GO; GO:0003723; F:RNA binding; IEA:UniProtKB-KW.
DR GO; GO:0006413; P:translational initiation; IEA:InterPro.
DR InterPro; IPR002681; Coat_Ilarvirus.
DR InterPro; IPR016405; Coat_Ilarvirus_prd.
DR Pfam; PF01787; Ilar_coat; 1.
DR PIRSF; PIRSF004078; Coat_Ilarvirus_prd; 1.
PE 3: Inferred from homology;
KW Capsid protein; Reference proteome; Ribonucleoprotein; RNA-binding;
KW T=3 icosahedral capsid protein; Viral nucleoprotein; Virion.
FT CHAIN 1..237
FT /note="Capsid protein"
FT /id="PRO_0000083225"
FT REGION 1..26
FT /note="Disordered"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
SQ SEQUENCE 237 AA; 26237 MW; E1FF87AEC7102523 CRC64;
MNTLIQGPDH PSNAMSSRAN NRSNNSRCPT CIDELDAMAR NCPAHNTVNT VSRRQRRNAA
RAAAYRNANA RVPLPLPVVS VSRPQAKASL RLPNNQVWVT RKASEWSAKT VDTNDAIPFK
TIVEGIPEIG AETKFFRLLI GFVAVSDGTF GMVDGVTGDV IPDPPVVGRL GFKKNTYRSR
DFDLGGKLLN QLDDRAVVWC LDERRREAKR VQLAGYWIAI SKPAPLMPPE DFLVNQD