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CAPSD_TOML
ID   CAPSD_TOML              Reviewed;         159 AA.
AC   P03576; P03577;
DT   21-JUL-1986, integrated into UniProtKB/Swiss-Prot.
DT   23-JAN-2007, sequence version 2.
DT   29-SEP-2021, entry version 82.
DE   RecName: Full=Capsid protein;
DE   AltName: Full=Coat protein;
GN   Name=CP;
OS   Tomato mosaic virus (strain L) (ToMV) (TMV strain tomato).
OC   Viruses; Riboviria; Orthornavirae; Kitrinoviricota; Alsuviricetes;
OC   Martellivirales; Virgaviridae; Tobamovirus.
OX   NCBI_TaxID=12252;
OH   NCBI_TaxID=4151; Antirrhinum majus (Garden snapdragon).
OH   NCBI_TaxID=4071; Capsicum (peppers).
OH   NCBI_TaxID=46246; Delphinium.
OH   NCBI_TaxID=4101; Petunia.
OH   NCBI_TaxID=4081; Solanum lycopersicum (Tomato) (Lycopersicon esculentum).
OH   NCBI_TaxID=13707; Tagetes (marigolds).
RN   [1]
RP   NUCLEOTIDE SEQUENCE [GENOMIC RNA].
RX   PubMed=6549393; DOI=10.1093/oxfordjournals.jbchem.a135026;
RA   Ohno T., Aoyagi M., Yamanashi Y., Saito H., Ikawa S., Meshi T., Okada Y.;
RT   "Nucleotide sequence of the tobacco mosaic virus (tomato strain) genome and
RT   comparison with the common strain genome.";
RL   J. Biochem. 96:1915-1923(1984).
RN   [2]
RP   NUCLEOTIDE SEQUENCE [GENOMIC RNA].
RX   PubMed=6304642; DOI=10.1093/nar/11.11.3767;
RA   Takamatsu N., Ohno T., Meshi T., Okada Y.;
RT   "Molecular cloning and nucleotide sequence of the 30K and the coat protein
RT   cistron of TMV (tomato strain) genome.";
RL   Nucleic Acids Res. 11:3767-3778(1983).
CC   -!- FUNCTION: Capsid protein self-assembles to form rod-shaped virions
CC       about 18 nm in diameter with a central canal enclosing the viral
CC       genomic RNA.
CC   -!- SUBCELLULAR LOCATION: Virion {ECO:0000305}.
CC   -!- SIMILARITY: Belongs to the virgaviridae capsid protein family.
CC       {ECO:0000305}.
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DR   EMBL; X02144; CAA26084.1; -; Genomic_RNA.
DR   RefSeq; NP_078449.1; NC_002692.1.
DR   SMR; P03576; -.
DR   GeneID; 920840; -.
DR   KEGG; vg:920840; -.
DR   Proteomes; UP000001451; Genome.
DR   GO; GO:0019029; C:helical viral capsid; IEA:UniProtKB-KW.
DR   GO; GO:0005198; F:structural molecule activity; IEA:InterPro.
DR   Gene3D; 1.20.120.70; -; 1.
DR   InterPro; IPR001337; TMV-like_coat.
DR   InterPro; IPR036417; TMV-like_coat_sf.
DR   Pfam; PF00721; TMV_coat; 1.
DR   SUPFAM; SSF47195; SSF47195; 1.
PE   3: Inferred from homology;
KW   Acetylation; Capsid protein; Helical capsid protein; Reference proteome;
KW   Virion.
FT   INIT_MET        1
FT                   /note="Removed; by host"
FT   CHAIN           2..159
FT                   /note="Capsid protein"
FT                   /id="PRO_0000144950"
FT   MOD_RES         2
FT                   /note="N-acetylserine; by host"
FT                   /evidence="ECO:0000250"
FT   CONFLICT        31
FT                   /note="S -> T (in Ref. 2)"
FT                   /evidence="ECO:0000305"
SQ   SEQUENCE   159 AA;  17746 MW;  9C6F2BB39B3F6D18 CRC64;
     MSYSITSPSQ FVFLSSVWAD PIELLNVCTN SLGNQFQTQQ ARTTVQQQFS EVWKPFPQST
     VRFPGDVYKV YRYNAVLDPL ITALLGAFDT RNRIIEVENQ QSPTTAETLD ATRRVDDATV
     AIRSAINNLV NELVRGTGLY NQNTFESMSG LVWTSAPAS
 
 
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