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CAPSD_TOMS1
ID   CAPSD_TOMS1             Reviewed;         159 AA.
AC   O41345;
DT   01-DEC-2000, integrated into UniProtKB/Swiss-Prot.
DT   23-JAN-2007, sequence version 3.
DT   03-AUG-2022, entry version 67.
DE   RecName: Full=Capsid protein;
DE   AltName: Full=Coat protein;
GN   Name=CP;
OS   Tomato mosaic virus (strain S-1) (ToMV).
OC   Viruses; Riboviria; Orthornavirae; Kitrinoviricota; Alsuviricetes;
OC   Martellivirales; Virgaviridae; Tobamovirus.
OX   NCBI_TaxID=138314;
OH   NCBI_TaxID=4151; Antirrhinum majus (Garden snapdragon).
OH   NCBI_TaxID=4071; Capsicum (peppers).
OH   NCBI_TaxID=46246; Delphinium.
OH   NCBI_TaxID=4101; Petunia.
OH   NCBI_TaxID=4081; Solanum lycopersicum (Tomato) (Lycopersicon esculentum).
OH   NCBI_TaxID=13707; Tagetes (marigolds).
RN   [1]
RP   NUCLEOTIDE SEQUENCE [GENOMIC RNA].
RA   Zhou X., Xue C., Chen Q., Qi Y., Li D.;
RT   "Complete nucleotide sequence of a Chinese isolate of tomato mosaic
RT   virus.";
RL   Submitted (FEB-1999) to the EMBL/GenBank/DDBJ databases.
CC   -!- FUNCTION: Capsid protein self-assembles to form rod-shaped virions
CC       about 18 nm in diameter with a central canal enclosing the viral
CC       genomic RNA.
CC   -!- SUBCELLULAR LOCATION: Virion {ECO:0000305}.
CC   -!- SIMILARITY: Belongs to the virgaviridae capsid protein family.
CC       {ECO:0000305}.
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DR   EMBL; AJ132845; CAB37000.1; -; Genomic_RNA.
DR   EMBL; AJ011934; CAA09879.1; -; Genomic_RNA.
DR   EMBL; Z98201; CAB10892.1; -; Genomic_RNA.
DR   SMR; O41345; -.
DR   Proteomes; UP000008254; Genome.
DR   GO; GO:0019029; C:helical viral capsid; IEA:UniProtKB-KW.
DR   GO; GO:0005198; F:structural molecule activity; IEA:InterPro.
DR   Gene3D; 1.20.120.70; -; 1.
DR   InterPro; IPR001337; TMV-like_coat.
DR   InterPro; IPR036417; TMV-like_coat_sf.
DR   Pfam; PF00721; TMV_coat; 1.
DR   SUPFAM; SSF47195; SSF47195; 1.
PE   3: Inferred from homology;
KW   Acetylation; Capsid protein; Helical capsid protein; Virion.
FT   INIT_MET        1
FT                   /note="Removed; by host"
FT                   /evidence="ECO:0000250"
FT   CHAIN           2..159
FT                   /note="Capsid protein"
FT                   /id="PRO_0000144951"
FT   MOD_RES         2
FT                   /note="N-acetylserine; by host"
FT                   /evidence="ECO:0000250"
SQ   SEQUENCE   159 AA;  17762 MW;  8AA3F1A557E56D18 CRC64;
     MSYSITSPSQ FVFLSSVWAD PIELLNVCTN SLGNQFQTQQ ARTTVQQQFS EVWKPFPQST
     VRFPGDVYKV YRYNAVLDPL ITALLGSFDT RNRIIEVENQ QSPTTAETLD ATRRVDDATV
     AIRSAINNLV NELVRGTGLY NQNTFESMSG LVWTSAPAS
 
 
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