CAPSD_TOMS1
ID CAPSD_TOMS1 Reviewed; 159 AA.
AC O41345;
DT 01-DEC-2000, integrated into UniProtKB/Swiss-Prot.
DT 23-JAN-2007, sequence version 3.
DT 03-AUG-2022, entry version 67.
DE RecName: Full=Capsid protein;
DE AltName: Full=Coat protein;
GN Name=CP;
OS Tomato mosaic virus (strain S-1) (ToMV).
OC Viruses; Riboviria; Orthornavirae; Kitrinoviricota; Alsuviricetes;
OC Martellivirales; Virgaviridae; Tobamovirus.
OX NCBI_TaxID=138314;
OH NCBI_TaxID=4151; Antirrhinum majus (Garden snapdragon).
OH NCBI_TaxID=4071; Capsicum (peppers).
OH NCBI_TaxID=46246; Delphinium.
OH NCBI_TaxID=4101; Petunia.
OH NCBI_TaxID=4081; Solanum lycopersicum (Tomato) (Lycopersicon esculentum).
OH NCBI_TaxID=13707; Tagetes (marigolds).
RN [1]
RP NUCLEOTIDE SEQUENCE [GENOMIC RNA].
RA Zhou X., Xue C., Chen Q., Qi Y., Li D.;
RT "Complete nucleotide sequence of a Chinese isolate of tomato mosaic
RT virus.";
RL Submitted (FEB-1999) to the EMBL/GenBank/DDBJ databases.
CC -!- FUNCTION: Capsid protein self-assembles to form rod-shaped virions
CC about 18 nm in diameter with a central canal enclosing the viral
CC genomic RNA.
CC -!- SUBCELLULAR LOCATION: Virion {ECO:0000305}.
CC -!- SIMILARITY: Belongs to the virgaviridae capsid protein family.
CC {ECO:0000305}.
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DR EMBL; AJ132845; CAB37000.1; -; Genomic_RNA.
DR EMBL; AJ011934; CAA09879.1; -; Genomic_RNA.
DR EMBL; Z98201; CAB10892.1; -; Genomic_RNA.
DR SMR; O41345; -.
DR Proteomes; UP000008254; Genome.
DR GO; GO:0019029; C:helical viral capsid; IEA:UniProtKB-KW.
DR GO; GO:0005198; F:structural molecule activity; IEA:InterPro.
DR Gene3D; 1.20.120.70; -; 1.
DR InterPro; IPR001337; TMV-like_coat.
DR InterPro; IPR036417; TMV-like_coat_sf.
DR Pfam; PF00721; TMV_coat; 1.
DR SUPFAM; SSF47195; SSF47195; 1.
PE 3: Inferred from homology;
KW Acetylation; Capsid protein; Helical capsid protein; Virion.
FT INIT_MET 1
FT /note="Removed; by host"
FT /evidence="ECO:0000250"
FT CHAIN 2..159
FT /note="Capsid protein"
FT /id="PRO_0000144951"
FT MOD_RES 2
FT /note="N-acetylserine; by host"
FT /evidence="ECO:0000250"
SQ SEQUENCE 159 AA; 17762 MW; 8AA3F1A557E56D18 CRC64;
MSYSITSPSQ FVFLSSVWAD PIELLNVCTN SLGNQFQTQQ ARTTVQQQFS EVWKPFPQST
VRFPGDVYKV YRYNAVLDPL ITALLGSFDT RNRIIEVENQ QSPTTAETLD ATRRVDDATV
AIRSAINNLV NELVRGTGLY NQNTFESMSG LVWTSAPAS