Y1794_SHEWM
ID Y1794_SHEWM Reviewed; 109 AA.
AC B1KNK1;
DT 24-MAR-2009, integrated into UniProtKB/Swiss-Prot.
DT 29-APR-2008, sequence version 1.
DT 25-MAY-2022, entry version 75.
DE RecName: Full=Nucleoid-associated protein Swoo_1794 {ECO:0000255|HAMAP-Rule:MF_00274};
GN OrderedLocusNames=Swoo_1794;
OS Shewanella woodyi (strain ATCC 51908 / MS32).
OC Bacteria; Proteobacteria; Gammaproteobacteria; Alteromonadales;
OC Shewanellaceae; Shewanella.
OX NCBI_TaxID=392500;
RN [1]
RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC STRAIN=ATCC 51908 / MS32;
RG US DOE Joint Genome Institute;
RA Copeland A., Lucas S., Lapidus A., Glavina del Rio T., Dalin E., Tice H.,
RA Bruce D., Goodwin L., Pitluck S., Sims D., Brettin T., Detter J.C., Han C.,
RA Kuske C.R., Schmutz J., Larimer F., Land M., Hauser L., Kyrpides N.,
RA Lykidis A., Zhao J.-S., Richardson P.;
RT "Complete sequence of Shewanella woodyi ATCC 51908.";
RL Submitted (FEB-2008) to the EMBL/GenBank/DDBJ databases.
CC -!- FUNCTION: Binds to DNA and alters its conformation. May be involved in
CC regulation of gene expression, nucleoid organization and DNA
CC protection. {ECO:0000255|HAMAP-Rule:MF_00274}.
CC -!- SUBUNIT: Homodimer. {ECO:0000255|HAMAP-Rule:MF_00274}.
CC -!- SUBCELLULAR LOCATION: Cytoplasm, nucleoid {ECO:0000255|HAMAP-
CC Rule:MF_00274}.
CC -!- SIMILARITY: Belongs to the YbaB/EbfC family. {ECO:0000255|HAMAP-
CC Rule:MF_00274}.
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DR EMBL; CP000961; ACA86078.1; -; Genomic_DNA.
DR RefSeq; WP_012324424.1; NC_010506.1.
DR AlphaFoldDB; B1KNK1; -.
DR SMR; B1KNK1; -.
DR STRING; 392500.Swoo_1794; -.
DR EnsemblBacteria; ACA86078; ACA86078; Swoo_1794.
DR KEGG; swd:Swoo_1794; -.
DR eggNOG; COG0718; Bacteria.
DR HOGENOM; CLU_140930_0_0_6; -.
DR OMA; MGNMMKQ; -.
DR OrthoDB; 1883809at2; -.
DR Proteomes; UP000002168; Chromosome.
DR GO; GO:0043590; C:bacterial nucleoid; IEA:UniProtKB-UniRule.
DR GO; GO:0005737; C:cytoplasm; IEA:UniProtKB-UniRule.
DR GO; GO:0003677; F:DNA binding; IEA:UniProtKB-UniRule.
DR Gene3D; 3.30.1310.10; -; 1.
DR HAMAP; MF_00274; DNA_YbaB_EbfC; 1.
DR InterPro; IPR036894; YbaB-like_sf.
DR InterPro; IPR004401; YbaB/EbfC.
DR PANTHER; PTHR33449; PTHR33449; 1.
DR Pfam; PF02575; YbaB_DNA_bd; 1.
DR PIRSF; PIRSF004555; UCP004555; 1.
DR SUPFAM; SSF82607; SSF82607; 1.
DR TIGRFAMs; TIGR00103; DNA_YbaB_EbfC; 1.
PE 3: Inferred from homology;
KW Cytoplasm; DNA-binding; Reference proteome.
FT CHAIN 1..109
FT /note="Nucleoid-associated protein Swoo_1794"
FT /id="PRO_1000114648"
FT REGION 88..109
FT /note="Disordered"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
SQ SEQUENCE 109 AA; 11873 MW; F4860683BB53CAC2 CRC64;
MFGKGGMGNL MKQAQQMQDK MAKVQEEIAR MEVTGEAGAG LVKVTMTGSH SVRKVDIDPS
LLEDDKEMLE DLIAAACNDA ARRVEENQKD KMAEVTGGMQ LPPGMKMPF