Y1797_COREF
ID Y1797_COREF Reviewed; 421 AA.
AC Q8FPI1;
DT 19-JUL-2004, integrated into UniProtKB/Swiss-Prot.
DT 01-MAR-2003, sequence version 1.
DT 03-AUG-2022, entry version 88.
DE RecName: Full=Uncharacterized RNA methyltransferase CE1797;
DE EC=2.1.1.-;
GN OrderedLocusNames=CE1797;
OS Corynebacterium efficiens (strain DSM 44549 / YS-314 / AJ 12310 / JCM 11189
OS / NBRC 100395).
OC Bacteria; Actinobacteria; Corynebacteriales; Corynebacteriaceae;
OC Corynebacterium.
OX NCBI_TaxID=196164;
RN [1]
RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC STRAIN=DSM 44549 / YS-314 / AJ 12310 / JCM 11189 / NBRC 100395;
RX PubMed=12840036; DOI=10.1101/gr.1285603;
RA Nishio Y., Nakamura Y., Kawarabayasi Y., Usuda Y., Kimura E., Sugimoto S.,
RA Matsui K., Yamagishi A., Kikuchi H., Ikeo K., Gojobori T.;
RT "Comparative complete genome sequence analysis of the amino acid
RT replacements responsible for the thermostability of Corynebacterium
RT efficiens.";
RL Genome Res. 13:1572-1579(2003).
CC -!- SIMILARITY: Belongs to the class I-like SAM-binding methyltransferase
CC superfamily. RNA M5U methyltransferase family. {ECO:0000255|PROSITE-
CC ProRule:PRU01024}.
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DR EMBL; BA000035; BAC18607.1; -; Genomic_DNA.
DR RefSeq; WP_006767794.1; NZ_GG700683.1.
DR AlphaFoldDB; Q8FPI1; -.
DR SMR; Q8FPI1; -.
DR STRING; 196164.23493638; -.
DR EnsemblBacteria; BAC18607; BAC18607; BAC18607.
DR KEGG; cef:CE1797; -.
DR eggNOG; COG2265; Bacteria.
DR HOGENOM; CLU_014689_7_0_11; -.
DR OMA; FYAGDMK; -.
DR OrthoDB; 1421660at2; -.
DR Proteomes; UP000001409; Chromosome.
DR GO; GO:0008173; F:RNA methyltransferase activity; IEA:InterPro.
DR GO; GO:0006396; P:RNA processing; IEA:InterPro.
DR Gene3D; 2.40.50.140; -; 1.
DR Gene3D; 3.40.50.150; -; 1.
DR InterPro; IPR030390; MeTrfase_TrmA_AS.
DR InterPro; IPR012340; NA-bd_OB-fold.
DR InterPro; IPR029063; SAM-dependent_MTases_sf.
DR InterPro; IPR002792; TRAM_dom.
DR InterPro; IPR010280; U5_MeTrfase_fam.
DR PANTHER; PTHR11061; PTHR11061; 2.
DR Pfam; PF01938; TRAM; 1.
DR Pfam; PF05958; tRNA_U5-meth_tr; 1.
DR SUPFAM; SSF50249; SSF50249; 1.
DR SUPFAM; SSF53335; SSF53335; 1.
DR PROSITE; PS51687; SAM_MT_RNA_M5U; 1.
DR PROSITE; PS50926; TRAM; 1.
DR PROSITE; PS01230; TRMA_1; 1.
PE 3: Inferred from homology;
KW Methyltransferase; Reference proteome; S-adenosyl-L-methionine;
KW Transferase.
FT CHAIN 1..421
FT /note="Uncharacterized RNA methyltransferase CE1797"
FT /id="PRO_0000161975"
FT DOMAIN 14..72
FT /note="TRAM"
FT /evidence="ECO:0000255|PROSITE-ProRule:PRU00208"
FT ACT_SITE 376
FT /note="Nucleophile"
FT /evidence="ECO:0000255|PROSITE-ProRule:PRU01024"
FT BINDING 250
FT /ligand="S-adenosyl-L-methionine"
FT /ligand_id="ChEBI:CHEBI:59789"
FT /evidence="ECO:0000255|PROSITE-ProRule:PRU01024"
FT BINDING 286
FT /ligand="S-adenosyl-L-methionine"
FT /ligand_id="ChEBI:CHEBI:59789"
FT /evidence="ECO:0000255|PROSITE-ProRule:PRU01024"
FT BINDING 308
FT /ligand="S-adenosyl-L-methionine"
FT /ligand_id="ChEBI:CHEBI:59789"
FT /evidence="ECO:0000255|PROSITE-ProRule:PRU01024"
FT BINDING 349
FT /ligand="S-adenosyl-L-methionine"
FT /ligand_id="ChEBI:CHEBI:59789"
FT /evidence="ECO:0000255|PROSITE-ProRule:PRU01024"
SQ SEQUENCE 421 AA; 44574 MW; 0EA965AAEEF0E224 CRC64;
MSDTAELTTD PTPDLTKGDT ITVEVTRPAH GGEGIAHHGG RVIFVRGGFP GDDVDVEITQ
VKKRFARGFV VQVNVASPHR VDSRCPAAAA GAGCCDYAEL SPEAELEIKS RVLTDQLQRI
GGLADIPTPE LFELEPSQGW RTRVRLGVDA SGRAGFRKLR SNDLVTDVAC SQVVPELIDG
LVGPGARTFT PDSEVIAAID DRGVRTVVEV RKAPRGRRAE TILHVLEGDG SVEQTVGDHT
WTFPVSGFWQ AHTKAPGAYS AFIGEVLDGA ELVDVDKRGP VAWDLYGGVG LFVPVINRAL
GAHVHSVELS EGSAEAGDDA LAGLPVTFHA GRVESVTSQL PKPHVVVLDP PRTGAGSDVV
ATIAGAKPQL VVHIGCDPAT FARDVADWSA GGYTLDRLAV FNAFPATHHY ETIGVFTRKS
A