Y1810_ALIFM
ID Y1810_ALIFM Reviewed; 111 AA.
AC B5FFM5;
DT 24-MAR-2009, integrated into UniProtKB/Swiss-Prot.
DT 14-OCT-2008, sequence version 1.
DT 25-MAY-2022, entry version 71.
DE RecName: Full=Nucleoid-associated protein VFMJ11_1810 {ECO:0000255|HAMAP-Rule:MF_00274};
GN OrderedLocusNames=VFMJ11_1810;
OS Aliivibrio fischeri (strain MJ11) (Vibrio fischeri).
OC Bacteria; Proteobacteria; Gammaproteobacteria; Vibrionales; Vibrionaceae;
OC Aliivibrio.
OX NCBI_TaxID=388396;
RN [1]
RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC STRAIN=MJ11;
RA Mandel M.J., Stabb E.V., Ruby E.G., Ferriera S., Johnson J., Kravitz S.,
RA Beeson K., Sutton G., Rogers Y.-H., Friedman R., Frazier M., Venter J.C.;
RT "Complete sequence of Vibrio fischeri strain MJ11.";
RL Submitted (AUG-2008) to the EMBL/GenBank/DDBJ databases.
CC -!- FUNCTION: Binds to DNA and alters its conformation. May be involved in
CC regulation of gene expression, nucleoid organization and DNA
CC protection. {ECO:0000255|HAMAP-Rule:MF_00274}.
CC -!- SUBUNIT: Homodimer. {ECO:0000255|HAMAP-Rule:MF_00274}.
CC -!- SUBCELLULAR LOCATION: Cytoplasm, nucleoid {ECO:0000255|HAMAP-
CC Rule:MF_00274}.
CC -!- SIMILARITY: Belongs to the YbaB/EbfC family. {ECO:0000255|HAMAP-
CC Rule:MF_00274}.
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DR EMBL; CP001139; ACH66468.1; -; Genomic_DNA.
DR RefSeq; WP_005420010.1; NC_011184.1.
DR AlphaFoldDB; B5FFM5; -.
DR SMR; B5FFM5; -.
DR EnsemblBacteria; ACH66468; ACH66468; VFMJ11_1810.
DR GeneID; 64243835; -.
DR KEGG; vfm:VFMJ11_1810; -.
DR HOGENOM; CLU_140930_0_0_6; -.
DR OMA; MGNMMKQ; -.
DR Proteomes; UP000001857; Chromosome I.
DR GO; GO:0043590; C:bacterial nucleoid; IEA:UniProtKB-UniRule.
DR GO; GO:0005737; C:cytoplasm; IEA:UniProtKB-UniRule.
DR GO; GO:0003677; F:DNA binding; IEA:UniProtKB-UniRule.
DR Gene3D; 3.30.1310.10; -; 1.
DR HAMAP; MF_00274; DNA_YbaB_EbfC; 1.
DR InterPro; IPR036894; YbaB-like_sf.
DR InterPro; IPR004401; YbaB/EbfC.
DR PANTHER; PTHR33449; PTHR33449; 1.
DR Pfam; PF02575; YbaB_DNA_bd; 1.
DR PIRSF; PIRSF004555; UCP004555; 1.
DR SUPFAM; SSF82607; SSF82607; 1.
DR TIGRFAMs; TIGR00103; DNA_YbaB_EbfC; 1.
PE 3: Inferred from homology;
KW Cytoplasm; DNA-binding.
FT CHAIN 1..111
FT /note="Nucleoid-associated protein VFMJ11_1810"
FT /id="PRO_1000114662"
FT REGION 1..23
FT /note="Disordered"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT REGION 89..111
FT /note="Disordered"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
SQ SEQUENCE 111 AA; 12273 MW; 83D66C8978138A6E CRC64;
MFGGKGGMGN LMKQAQQMQD RMQKMQEEIA NMEVTGESGA GLVKVTITGS HSVRRVEIDP
SLMEEDEKEM LEDLIAAAFN DASRRIEETQ KEKMASVTGG MQMPPGFKMP F