Y1816_ARATH
ID Y1816_ARATH Reviewed; 221 AA.
AC Q8VZ13; Q9LMZ3; Q9SGE4;
DT 15-JUN-2010, integrated into UniProtKB/Swiss-Prot.
DT 01-MAR-2002, sequence version 1.
DT 03-AUG-2022, entry version 90.
DE RecName: Full=Uncharacterized protein At1g08160;
GN OrderedLocusNames=At1g08160; ORFNames=T23G18.2, T6D22.24;
OS Arabidopsis thaliana (Mouse-ear cress).
OC Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
OC Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae;
OC rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis.
OX NCBI_TaxID=3702;
RN [1]
RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC STRAIN=cv. Columbia;
RX PubMed=11130712; DOI=10.1038/35048500;
RA Theologis A., Ecker J.R., Palm C.J., Federspiel N.A., Kaul S., White O.,
RA Alonso J., Altafi H., Araujo R., Bowman C.L., Brooks S.Y., Buehler E.,
RA Chan A., Chao Q., Chen H., Cheuk R.F., Chin C.W., Chung M.K., Conn L.,
RA Conway A.B., Conway A.R., Creasy T.H., Dewar K., Dunn P., Etgu P.,
RA Feldblyum T.V., Feng J.-D., Fong B., Fujii C.Y., Gill J.E., Goldsmith A.D.,
RA Haas B., Hansen N.F., Hughes B., Huizar L., Hunter J.L., Jenkins J.,
RA Johnson-Hopson C., Khan S., Khaykin E., Kim C.J., Koo H.L.,
RA Kremenetskaia I., Kurtz D.B., Kwan A., Lam B., Langin-Hooper S., Lee A.,
RA Lee J.M., Lenz C.A., Li J.H., Li Y.-P., Lin X., Liu S.X., Liu Z.A.,
RA Luros J.S., Maiti R., Marziali A., Militscher J., Miranda M., Nguyen M.,
RA Nierman W.C., Osborne B.I., Pai G., Peterson J., Pham P.K., Rizzo M.,
RA Rooney T., Rowley D., Sakano H., Salzberg S.L., Schwartz J.R., Shinn P.,
RA Southwick A.M., Sun H., Tallon L.J., Tambunga G., Toriumi M.J., Town C.D.,
RA Utterback T., Van Aken S., Vaysberg M., Vysotskaia V.S., Walker M., Wu D.,
RA Yu G., Fraser C.M., Venter J.C., Davis R.W.;
RT "Sequence and analysis of chromosome 1 of the plant Arabidopsis thaliana.";
RL Nature 408:816-820(2000).
RN [2]
RP GENOME REANNOTATION.
RC STRAIN=cv. Columbia;
RX PubMed=27862469; DOI=10.1111/tpj.13415;
RA Cheng C.Y., Krishnakumar V., Chan A.P., Thibaud-Nissen F., Schobel S.,
RA Town C.D.;
RT "Araport11: a complete reannotation of the Arabidopsis thaliana reference
RT genome.";
RL Plant J. 89:789-804(2017).
RN [3]
RP NUCLEOTIDE SEQUENCE [LARGE SCALE MRNA].
RC STRAIN=cv. Columbia;
RX PubMed=14593172; DOI=10.1126/science.1088305;
RA Yamada K., Lim J., Dale J.M., Chen H., Shinn P., Palm C.J., Southwick A.M.,
RA Wu H.C., Kim C.J., Nguyen M., Pham P.K., Cheuk R.F., Karlin-Newmann G.,
RA Liu S.X., Lam B., Sakano H., Wu T., Yu G., Miranda M., Quach H.L.,
RA Tripp M., Chang C.H., Lee J.M., Toriumi M.J., Chan M.M., Tang C.C.,
RA Onodera C.S., Deng J.M., Akiyama K., Ansari Y., Arakawa T., Banh J.,
RA Banno F., Bowser L., Brooks S.Y., Carninci P., Chao Q., Choy N., Enju A.,
RA Goldsmith A.D., Gurjal M., Hansen N.F., Hayashizaki Y., Johnson-Hopson C.,
RA Hsuan V.W., Iida K., Karnes M., Khan S., Koesema E., Ishida J., Jiang P.X.,
RA Jones T., Kawai J., Kamiya A., Meyers C., Nakajima M., Narusaka M.,
RA Seki M., Sakurai T., Satou M., Tamse R., Vaysberg M., Wallender E.K.,
RA Wong C., Yamamura Y., Yuan S., Shinozaki K., Davis R.W., Theologis A.,
RA Ecker J.R.;
RT "Empirical analysis of transcriptional activity in the Arabidopsis
RT genome.";
RL Science 302:842-846(2003).
CC -!- SUBCELLULAR LOCATION: Membrane {ECO:0000305}; Single-pass membrane
CC protein {ECO:0000305}.
CC -!- SEQUENCE CAUTION:
CC Sequence=AAF18257.1; Type=Erroneous gene model prediction; Note=The predicted gene has been split into 4 genes: At1g08135, At1g08140, At1g08150 and At1g08160.; Evidence={ECO:0000305};
CC Sequence=AAF79832.1; Type=Erroneous gene model prediction; Note=The predicted gene has been split into 4 genes: At1g08135, At1g08140, At1g08150 and At1g08160.; Evidence={ECO:0000305};
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DR EMBL; AC011438; AAF18257.1; ALT_SEQ; Genomic_DNA.
DR EMBL; AC026875; AAF79832.1; ALT_SEQ; Genomic_DNA.
DR EMBL; CP002684; AEE28255.1; -; Genomic_DNA.
DR EMBL; AY065386; AAL38827.1; -; mRNA.
DR EMBL; AY091277; AAM14216.1; -; mRNA.
DR PIR; A86216; A86216.
DR RefSeq; NP_849612.1; NM_179281.2.
DR AlphaFoldDB; Q8VZ13; -.
DR BioGRID; 22578; 1.
DR STRING; 3702.AT1G08160.1; -.
DR PaxDb; Q8VZ13; -.
DR PRIDE; Q8VZ13; -.
DR ProteomicsDB; 228722; -.
DR EnsemblPlants; AT1G08160.1; AT1G08160.1; AT1G08160.
DR GeneID; 837337; -.
DR Gramene; AT1G08160.1; AT1G08160.1; AT1G08160.
DR KEGG; ath:AT1G08160; -.
DR Araport; AT1G08160; -.
DR TAIR; locus:2205180; AT1G08160.
DR eggNOG; ENOG502RY5H; Eukaryota.
DR HOGENOM; CLU_051752_5_0_1; -.
DR OMA; ISPFKQR; -.
DR OrthoDB; 1323926at2759; -.
DR PhylomeDB; Q8VZ13; -.
DR PRO; PR:Q8VZ13; -.
DR Proteomes; UP000006548; Chromosome 1.
DR ExpressionAtlas; Q8VZ13; baseline and differential.
DR GO; GO:0016021; C:integral component of membrane; IEA:UniProtKB-KW.
DR InterPro; IPR004864; LEA_2.
DR Pfam; PF03168; LEA_2; 1.
PE 2: Evidence at transcript level;
KW Membrane; Reference proteome; Transmembrane; Transmembrane helix.
FT CHAIN 1..221
FT /note="Uncharacterized protein At1g08160"
FT /id="PRO_0000394998"
FT TRANSMEM 37..57
FT /note="Helical"
FT /evidence="ECO:0000255"
FT REGION 1..30
FT /note="Disordered"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT COMPBIAS 11..28
FT /note="Polar residues"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
SQ SEQUENCE 221 AA; 25158 MW; 712E3FFB1E6D10E3 CRC64;
MVPPNPAHQP ARRTQPQLQP QSQPRAQPLP GRRMNPVLCI IVALVLLGLL VGLAILITYL
TLRPKRLIYT VEAASVQEFA IGNNDDHINA KFSYVIKSYN PEKHVSVRYH SMRISTAHHN
QSVAHKNISP FKQRPKNETR IETQLVSHNV ALSKFNARDL RAEKSKGTIE MEVYITARVS
YKTWIFRSRR RTLKAVCTPV MINVTSSSLD GFQRVLCKTR L
