CAPSD_TYLCC
ID CAPSD_TYLCC Reviewed; 256 AA.
AC Q9DXE8;
DT 04-DEC-2007, integrated into UniProtKB/Swiss-Prot.
DT 01-MAR-2001, sequence version 1.
DT 12-AUG-2020, entry version 63.
DE RecName: Full=Capsid protein;
DE AltName: Full=Coat protein;
DE Short=CP;
GN ORFNames=V1;
OS Tomato yellow leaf curl China virus (TYLCCNV).
OC Viruses; Monodnaviria; Shotokuvirae; Cressdnaviricota; Repensiviricetes;
OC Geplafuvirales; Geminiviridae; Begomovirus.
OX NCBI_TaxID=185793;
OH NCBI_TaxID=4097; Nicotiana tabacum (Common tobacco).
OH NCBI_TaxID=185191; Sigesbeckia orientalis.
OH NCBI_TaxID=4081; Solanum lycopersicum (Tomato) (Lycopersicon esculentum).
RN [1]
RP NUCLEOTIDE SEQUENCE [GENOMIC DNA].
RC STRAIN=Isolate CHI;
RX PubMed=11682126; DOI=10.1016/s0168-1702(01)00363-x;
RA Yin Q., Yang H., Gong Q., Wang H., Liu Y., Hong Y., Tien P.;
RT "Tomato yellow leaf curl China virus: monopartite genome organization and
RT agroinfection of plants.";
RL Virus Res. 81:69-76(2001).
CC -!- FUNCTION: Encapsidates the viral genome into characteristic twinned
CC ('geminate') particles. Binds the genomic viral ssDNA and shuttles it
CC into and out of the cell nucleus. Plays a role in protection of the
CC genome from degradation, virus acquisition and transmission by insect
CC vectors, infectivity, and systemic movement. The CP of monopartite
CC geminiviruses is absolutely essential for virus movement (By
CC similarity). {ECO:0000250}.
CC -!- SUBUNIT: Homomultimer. Binds to single-stranded and double-stranded
CC viral DNA. Interacts (via nuclear localization signals) with host
CC importin alpha-1a (By similarity). {ECO:0000250}.
CC -!- SUBCELLULAR LOCATION: Virion {ECO:0000305}. Host nucleus {ECO:0000250}.
CC Note=It is actively transported into the host cell nucleus. It may be
CC exported out of the nucleus through a nuclear export signal for cell-
CC to-cell movement and spread (By similarity). {ECO:0000250}.
CC -!- SIMILARITY: Belongs to the geminiviridae capsid protein family.
CC {ECO:0000305}.
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DR EMBL; AF311734; AAG27472.1; -; Genomic_DNA.
DR RefSeq; NP_660165.1; NC_004044.1.
DR SMR; Q9DXE8; -.
DR GeneID; 949226; -.
DR KEGG; vg:949226; -.
DR Proteomes; UP000008267; Genome.
DR GO; GO:0042025; C:host cell nucleus; IEA:UniProtKB-SubCell.
DR GO; GO:0039615; C:T=1 icosahedral viral capsid; IEA:UniProtKB-KW.
DR GO; GO:0003677; F:DNA binding; IEA:UniProtKB-KW.
DR GO; GO:0046872; F:metal ion binding; IEA:UniProtKB-KW.
DR GO; GO:0005198; F:structural molecule activity; IEA:InterPro.
DR GO; GO:0046718; P:viral entry into host cell; IEA:UniProtKB-KW.
DR GO; GO:0075732; P:viral penetration into host nucleus; IEA:UniProtKB-KW.
DR Gene3D; 2.60.120.20; -; 1.
DR InterPro; IPR000650; Gem_coat_AR1.
DR InterPro; IPR000263; GV_A/BR1_coat.
DR InterPro; IPR029053; Viral_coat.
DR Pfam; PF00844; Gemini_coat; 1.
DR PRINTS; PR00224; GEMCOATAR1.
DR PRINTS; PR00223; GEMCOATARBR1.
PE 3: Inferred from homology;
KW Capsid protein; DNA-binding; Host nucleus; Metal-binding;
KW Reference proteome; T=1 icosahedral capsid protein;
KW Viral penetration into host nucleus; Virion; Virus entry into host cell;
KW Zinc; Zinc-finger.
FT CHAIN 1..256
FT /note="Capsid protein"
FT /id="PRO_0000312151"
FT ZN_FING 68..85
FT /evidence="ECO:0000255"
FT MOTIF 3..20
FT /note="Bipartite nuclear localization signal"
FT /evidence="ECO:0000255"
FT MOTIF 40..54
FT /note="Nuclear localization signal"
FT /evidence="ECO:0000255"
FT MOTIF 101..122
FT /note="Nuclear export signal"
FT /evidence="ECO:0000255"
FT MOTIF 200..247
FT /note="Bipartite nuclear localization signal"
FT /evidence="ECO:0000255"
SQ SEQUENCE 256 AA; 29886 MW; 7C1AFC11EF50F13A CRC64;
MAKRPADIVI STPASKVRRR LNFDSPYTGR VAAPTVRVTR RQMWSNRPMY RKPMMYRMYR
SPDVPRGCEG PCKVQSCEAR HDVSHTGKVI CVSDVTRGNG ITHRVGKRFC VKSIYVIGKI
WMDENIKFKN HTNTVMFFLV RDRRPSGTPM DFQQVFNCYD NEPSTATVKN DLRDRFQVRR
KFYSTVTGGQ YACKEQALVK RFIRLNTHVV YNHQEQAKYE NHTENALLLY MACTHASNPV
YATLKVRIYF YDSQMN