CAPSD_VESVA
ID CAPSD_VESVA Reviewed; 701 AA.
AC P89681;
DT 30-NOV-2010, integrated into UniProtKB/Swiss-Prot.
DT 01-MAR-2001, sequence version 3.
DT 07-OCT-2020, entry version 61.
DE RecName: Full=Capsid protein;
DE Short=CP;
DE AltName: Full=Coat protein;
DE AltName: Full=VP1;
DE Flags: Precursor;
GN ORFNames=ORF2;
OS Vesicular exanthema of swine virus serotype A48 (isolate Swine/United
OS States/A48/1948) (VESV).
OC Viruses; Riboviria; Orthornavirae; Pisuviricota; Pisoniviricetes;
OC Picornavirales; Caliciviridae; Vesivirus.
OX NCBI_TaxID=85617;
OH NCBI_TaxID=9823; Sus scrofa (Pig).
RN [1]
RP NUCLEOTIDE SEQUENCE [GENOMIC RNA].
RX PubMed=9660070; DOI=10.1016/s0168-1702(98)00013-6;
RA Neill J.D., Meyer R.F., Seal B.S.;
RT "The capsid protein of vesicular exanthema of swine virus serotype A48:
RT relationship to the capsid protein of other animal caliciviruses.";
RL Virus Res. 54:39-50(1998).
RN [2]
RP NUCLEOTIDE SEQUENCE [GENOMIC RNA].
RA Neill J.D., Seal B.S., Ridpath J.F.;
RT "Complete nucleotide sequence of the genomic RNA of vesicular exanthema of
RT swine virus A48.";
RL Submitted (AUG-2000) to the EMBL/GenBank/DDBJ databases.
CC -!- FUNCTION: Capsid protein self-assembles to form an icosahedral capsid
CC with a T=3 symmetry, about 38 nm in diameter, and consisting of 180
CC capsid proteins. A smaller form of capsid with a diameter of 23 nm
CC might be capsid proteins assembled as icosahedron with T=1 symmetry.
CC The capsid encapsulates the genomic RNA and VP2 proteins. Attaches
CC virion to target cells. Once attached, the virion is endocytosed.
CC Acidification of the endosome induces conformational change of capsid
CC protein thereby injecting virus genomic RNA into host cytoplasm (By
CC similarity). {ECO:0000250}.
CC -!- SUBUNIT: Homodimer. Homomultimer. May bind to VP3 and Vpg proteins (By
CC similarity). {ECO:0000250}.
CC -!- SUBCELLULAR LOCATION: Virion. Host cytoplasm {ECO:0000250}.
CC -!- PTM: Cleaved by virus calcivirin to produce mature capsid protein.
CC {ECO:0000250}.
CC -!- SIMILARITY: Belongs to the caliciviridae capsid protein family.
CC {ECO:0000305}.
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DR EMBL; U76874; AAC13889.2; -; Genomic_RNA.
DR RefSeq; NP_066256.1; NC_002551.1.
DR SMR; P89681; -.
DR GeneID; 911832; -.
DR KEGG; vg:911832; -.
DR Proteomes; UP000007661; Genome.
DR GO; GO:0030430; C:host cell cytoplasm; IEA:UniProtKB-SubCell.
DR GO; GO:0039617; C:T=3 icosahedral viral capsid; IEA:UniProtKB-KW.
DR CDD; cd00205; rhv_like; 1.
DR Gene3D; 2.60.120.20; -; 1.
DR InterPro; IPR004005; Calicivirus_coat.
DR InterPro; IPR033703; Rhv-like.
DR InterPro; IPR029053; Viral_coat.
DR Pfam; PF00915; Calici_coat; 1.
PE 3: Inferred from homology;
KW Capsid protein; Host cytoplasm; Reference proteome;
KW T=3 icosahedral capsid protein; Virion.
FT PROPEP 1..152
FT /evidence="ECO:0000250"
FT /id="PRO_0000402463"
FT CHAIN 153..701
FT /note="Capsid protein"
FT /id="PRO_0000402464"
SQ SEQUENCE 701 AA; 77477 MW; BE8FCFD9D44DF62A CRC64;
MATTHTLLSF DNLEFLLHRK DLTDLYGKRC GTLNLVINPY ELFLPDELDD DCCDDPFNCC
FSDVYASIGT EYSYIDPPDL IYEEHCATNG TWPDGTPCEP ILPPFTITGT HHYYATKPGE
VVSGILSKLR VFLGSLLRST ADVNSNFTFR AESDGPGSTE IVTEEQGTIV QQQPAPAPTA
LATLATASTG KSVEQEWMTF FSYHTSINWS TVESQGKVLY SQALNPSINP YLDHISKLYS
TWSGGIDVRF TVSGSGVFGG KLAALLVPPG VEPIESVSML QYPHVLFDAR QTEPVIFTIP
DIRKTLFHSM DETDTTKLVI MVYKNGADTK TTCSITVETR PSADFTFALL KPPGSLIKHG
SIPSDLIPRN SAHWLGNRWW SMISGFSVQP RVFQSNRHFD FDSTTTGWST PYYIPIEITI
TAKVKGNNHW YHVIAHDKAL VPGIPDGWPD TTIPSEVHAS NGNFDYAKGF HDDKEIVNPA
NNNTHFKGTY ICGTLSTIKD PEKAENQSES QKKSSTMYVA TADLGDNKVK PQHKISSQKL
VVYFDGPEKD LTMNATLSPL GYTLVDDQPI GSNSSTVVRI ATLPEAFTQG GNYPIFYVNK
TNKGYFDKAT TDCYNSQILM TSQRLAEGNY SLPPDSLAVY RITDSSSQWF DIGINHDGFS
YVGLPDLPAD LTFPLTSTFM GVQLARVKLA SKVKVTRNSI K