Y1888_LISIN
ID Y1888_LISIN Reviewed; 174 AA.
AC Q92AN2;
DT 24-MAY-2004, integrated into UniProtKB/Swiss-Prot.
DT 01-DEC-2001, sequence version 1.
DT 25-MAY-2022, entry version 87.
DE RecName: Full=UPF0316 protein lin1888 {ECO:0000255|HAMAP-Rule:MF_01515};
GN OrderedLocusNames=lin1888;
OS Listeria innocua serovar 6a (strain ATCC BAA-680 / CLIP 11262).
OC Bacteria; Firmicutes; Bacilli; Bacillales; Listeriaceae; Listeria.
OX NCBI_TaxID=272626;
RN [1]
RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC STRAIN=ATCC BAA-680 / CLIP 11262;
RX PubMed=11679669; DOI=10.1126/science.1063447;
RA Glaser P., Frangeul L., Buchrieser C., Rusniok C., Amend A., Baquero F.,
RA Berche P., Bloecker H., Brandt P., Chakraborty T., Charbit A.,
RA Chetouani F., Couve E., de Daruvar A., Dehoux P., Domann E.,
RA Dominguez-Bernal G., Duchaud E., Durant L., Dussurget O., Entian K.-D.,
RA Fsihi H., Garcia-del Portillo F., Garrido P., Gautier L., Goebel W.,
RA Gomez-Lopez N., Hain T., Hauf J., Jackson D., Jones L.-M., Kaerst U.,
RA Kreft J., Kuhn M., Kunst F., Kurapkat G., Madueno E., Maitournam A.,
RA Mata Vicente J., Ng E., Nedjari H., Nordsiek G., Novella S., de Pablos B.,
RA Perez-Diaz J.-C., Purcell R., Remmel B., Rose M., Schlueter T., Simoes N.,
RA Tierrez A., Vazquez-Boland J.-A., Voss H., Wehland J., Cossart P.;
RT "Comparative genomics of Listeria species.";
RL Science 294:849-852(2001).
CC -!- SUBCELLULAR LOCATION: Cell membrane {ECO:0000255|HAMAP-Rule:MF_01515};
CC Multi-pass membrane protein {ECO:0000255|HAMAP-Rule:MF_01515}.
CC -!- SIMILARITY: Belongs to the UPF0316 family. {ECO:0000255|HAMAP-
CC Rule:MF_01515}.
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DR EMBL; AL596170; CAC97118.1; -; Genomic_DNA.
DR PIR; AF1668; AF1668.
DR RefSeq; WP_003762861.1; NC_003212.1.
DR AlphaFoldDB; Q92AN2; -.
DR SMR; Q92AN2; -.
DR STRING; 272626.lin1888; -.
DR EnsemblBacteria; CAC97118; CAC97118; CAC97118.
DR GeneID; 61171983; -.
DR KEGG; lin:lin1888; -.
DR eggNOG; COG4843; Bacteria.
DR HOGENOM; CLU_106166_1_0_9; -.
DR OMA; KLALGYI; -.
DR OrthoDB; 1480783at2; -.
DR Proteomes; UP000002513; Chromosome.
DR GO; GO:0016021; C:integral component of membrane; IEA:UniProtKB-KW.
DR GO; GO:0005886; C:plasma membrane; IEA:UniProtKB-SubCell.
DR HAMAP; MF_01515; UPF0316; 1.
DR InterPro; IPR019264; DUF2179.
DR InterPro; IPR044035; DUF5698.
DR InterPro; IPR022930; UPF0316.
DR PANTHER; PTHR40060; PTHR40060; 1.
DR Pfam; PF10035; DUF2179; 1.
DR Pfam; PF18955; DUF5698; 1.
PE 3: Inferred from homology;
KW Cell membrane; Membrane; Transmembrane; Transmembrane helix.
FT CHAIN 1..174
FT /note="UPF0316 protein lin1888"
FT /id="PRO_0000171946"
FT TRANSMEM 4..24
FT /note="Helical"
FT /evidence="ECO:0000255|HAMAP-Rule:MF_01515"
FT TRANSMEM 36..56
FT /note="Helical"
FT /evidence="ECO:0000255|HAMAP-Rule:MF_01515"
FT TRANSMEM 62..82
FT /note="Helical"
FT /evidence="ECO:0000255|HAMAP-Rule:MF_01515"
SQ SEQUENCE 174 AA; 19683 MW; A2A038BEB4969A8C CRC64;
MDNGIFIVAT IFVVNILYVT IYTVRLLLTM KGYRYLAALS SVFEMIIYVV ALSLVLDNLN
NIANVLAYAV GFGVGIIVGM KIEERIALGY ITVNVITKEY NLDLPNQIRD LGYGVTSWLA
SGRDGERMML EILTQRKNER KLYKQIIEID NGAFIVSSEP KQIHGGFWIK QVRK