Y189_CLOPE
ID Y189_CLOPE Reviewed; 279 AA.
AC P26833;
DT 01-AUG-1992, integrated into UniProtKB/Swiss-Prot.
DT 01-AUG-1992, sequence version 1.
DT 25-MAY-2022, entry version 121.
DE RecName: Full=Uncharacterized HTH-type transcriptional regulator CPE0189;
GN OrderedLocusNames=CPE0189;
OS Clostridium perfringens (strain 13 / Type A).
OC Bacteria; Firmicutes; Clostridia; Eubacteriales; Clostridiaceae;
OC Clostridium.
OX NCBI_TaxID=195102;
RN [1]
RP NUCLEOTIDE SEQUENCE [GENOMIC DNA].
RC STRAIN=CPN50;
RX PubMed=8177218; DOI=10.1007/bf00280319;
RA Canard B., Garnier T., Saint-Joanis B., Cole S.T.;
RT "Molecular genetic analysis of the nagH gene encoding a hyaluronidase of
RT Clostridium perfringens.";
RL Mol. Gen. Genet. 243:215-224(1994).
RN [2]
RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC STRAIN=13 / Type A;
RX PubMed=11792842; DOI=10.1073/pnas.022493799;
RA Shimizu T., Ohtani K., Hirakawa H., Ohshima K., Yamashita A., Shiba T.,
RA Ogasawara N., Hattori M., Kuhara S., Hayashi H.;
RT "Complete genome sequence of Clostridium perfringens, an anaerobic flesh-
RT eater.";
RL Proc. Natl. Acad. Sci. U.S.A. 99:996-1001(2002).
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DR EMBL; M81878; AAA23257.1; -; Genomic_DNA.
DR EMBL; BA000016; BAB79895.1; -; Genomic_DNA.
DR PIR; S43902; S43902.
DR RefSeq; WP_003457572.1; NC_003366.1.
DR AlphaFoldDB; P26833; -.
DR SMR; P26833; -.
DR STRING; 195102.gene:10489433; -.
DR EnsemblBacteria; BAB79895; BAB79895; BAB79895.
DR GeneID; 29572696; -.
DR KEGG; cpe:CPE0189; -.
DR HOGENOM; CLU_055769_0_0_9; -.
DR OMA; PNLIPHI; -.
DR Proteomes; UP000000818; Chromosome.
DR GO; GO:0097367; F:carbohydrate derivative binding; IEA:InterPro.
DR GO; GO:0003677; F:DNA binding; IEA:UniProtKB-KW.
DR GO; GO:0003700; F:DNA-binding transcription factor activity; IEA:InterPro.
DR GO; GO:1901135; P:carbohydrate derivative metabolic process; IEA:InterPro.
DR CDD; cd05013; SIS_RpiR; 1.
DR Gene3D; 1.10.10.10; -; 1.
DR InterPro; IPR009057; Homeobox-like_sf.
DR InterPro; IPR000281; HTH_RpiR.
DR InterPro; IPR035472; RpiR-like_SIS.
DR InterPro; IPR001347; SIS_dom.
DR InterPro; IPR046348; SIS_dom_sf.
DR InterPro; IPR036388; WH-like_DNA-bd_sf.
DR Pfam; PF01418; HTH_6; 1.
DR Pfam; PF01380; SIS; 1.
DR SUPFAM; SSF46689; SSF46689; 1.
DR SUPFAM; SSF53697; SSF53697; 1.
DR PROSITE; PS51071; HTH_RPIR; 1.
DR PROSITE; PS51464; SIS; 1.
PE 4: Predicted;
KW DNA-binding; Reference proteome; Transcription; Transcription regulation.
FT CHAIN 1..279
FT /note="Uncharacterized HTH-type transcriptional regulator
FT CPE0189"
FT /id="PRO_0000068631"
FT DOMAIN 1..77
FT /note="HTH rpiR-type"
FT /evidence="ECO:0000255|PROSITE-ProRule:PRU00390"
FT DOMAIN 123..263
FT /note="SIS"
FT /evidence="ECO:0000255|PROSITE-ProRule:PRU00797"
FT DNA_BIND 37..56
FT /note="H-T-H motif"
FT /evidence="ECO:0000255|PROSITE-ProRule:PRU00390"
SQ SEQUENCE 279 AA; 31254 MW; F40B1203634A65AA CRC64;
MGILEQLENP KFKATKSEKT LIEYIKSDLD NIIYKSISII AKESGVGEAT ITRFTKKLGF
NGFQDFKVTL AKEISNKKNT SIINLHVHRD ESVTETANKM LKSSINILEQ TVKQIDLDLM
CKCRDLIMNA KRVYFIGIGY SGIAATDINY KFMRIGFTTV PVTDSHTMVI MSSITNDDDV
IVAISNSGTT KEVIKTVKQA KENGTKIITL TEDSDNPLRK LSDYELTYTS AETIFETGSI
SSKIPQIFLL DLLYTEVIKE MFSEAVEKKI KTTSAILND