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Y1R1_DROME
ID   Y1R1_DROME              Reviewed;         471 AA.
AC   P16424;
DT   01-AUG-1990, integrated into UniProtKB/Swiss-Prot.
DT   01-AUG-1990, sequence version 1.
DT   25-MAY-2022, entry version 84.
DE   RecName: Full=Uncharacterized 50 kDa protein in type I retrotransposable element R1DM;
DE   AltName: Full=ORF 1;
GN   Name=R1A1-element\ORF1;
OS   Drosophila melanogaster (Fruit fly).
OC   Eukaryota; Metazoa; Ecdysozoa; Arthropoda; Hexapoda; Insecta; Pterygota;
OC   Neoptera; Endopterygota; Diptera; Brachycera; Muscomorpha; Ephydroidea;
OC   Drosophilidae; Drosophila; Sophophora.
OX   NCBI_TaxID=7227;
RN   [1]
RP   NUCLEOTIDE SEQUENCE [GENOMIC DNA].
RC   STRAIN=Oregon-R;
RX   PubMed=1690812; DOI=10.1016/0022-2836(90)90303-4;
RA   Jakubczak J.L., Xiong Y., Eickbush T.H.;
RT   "Type I (R1) and type II (R2) ribosomal DNA insertions of Drosophila
RT   melanogaster are retrotransposable elements closely related to those of
RT   Bombyx mori.";
RL   J. Mol. Biol. 212:37-52(1990).
CC   -!- SIMILARITY: To corresponding ORF of B.mori (R1BM). {ECO:0000305}.
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DR   EMBL; X51968; CAA36226.1; -; Genomic_DNA.
DR   PIR; S09110; S09110.
DR   AlphaFoldDB; P16424; -.
DR   FlyBase; FBgn0044825; R1A1-element\ORF1.
DR   PRO; PR:P16424; -.
DR   GO; GO:0003676; F:nucleic acid binding; IEA:InterPro.
DR   GO; GO:0008270; F:zinc ion binding; IEA:InterPro.
DR   InterPro; IPR001878; Znf_CCHC.
DR   InterPro; IPR036875; Znf_CCHC_sf.
DR   SMART; SM00343; ZnF_C2HC; 2.
DR   SUPFAM; SSF57756; SSF57756; 1.
DR   PROSITE; PS50158; ZF_CCHC; 1.
PE   4: Predicted;
KW   Metal-binding; Repeat; Transposable element; Zinc; Zinc-finger.
FT   CHAIN           1..471
FT                   /note="Uncharacterized 50 kDa protein in type I
FT                   retrotransposable element R1DM"
FT                   /id="PRO_0000066075"
FT   ZN_FING         397..414
FT                   /note="CCHC-type 1"
FT                   /evidence="ECO:0000255|PROSITE-ProRule:PRU00047"
FT   ZN_FING         417..434
FT                   /note="CCHC-type 2"
FT                   /evidence="ECO:0000255|PROSITE-ProRule:PRU00047"
FT   REGION          13..57
FT                   /note="Disordered"
FT                   /evidence="ECO:0000256|SAM:MobiDB-lite"
FT   REGION          438..457
FT                   /note="Gag-like cysteine motif"
FT   COMPBIAS        21..39
FT                   /note="Polar residues"
FT                   /evidence="ECO:0000256|SAM:MobiDB-lite"
SQ   SEQUENCE   471 AA;  50380 MW;  929731215DC2AF8A CRC64;
     PVSASIRLLD SSKGGATIGA TPMESDSSVS ALSGSSASKV SRRGRRRSHL ASKSSAPTQA
     KLVALASNGV PEPVGVLEEA FSSLEDARAA TSNAANDAAP PAAAPAVDHT VAPDVSTAAK
     IAATTATAAT AAARAGQAAM MAELSATQRM VRNSFRSLGG VDTEELSCAI SRYDELVMAL
     MLRCGELETR LAMPPPPPPP SKANTTAANA PQMPQVAPIA APRTTKVRET WSAVVKCDDP
     ALSGKAIAEK VRTMVAPSLG VRVHEVRELP SRWWCDHSYS SVGELQKVMA SKRFAELGLN
     VARNAAEKPK VIVYDVDTAI GPEEFMQELH ENNFDSEMTL AQFKKSVHLV TKAWSATDGA
     TVNVTLEVDD RAMAKLDVGR VYIKWFSFRC RSQVRTYACH RCVGFDHKVS ECRQKESVCR
     QCGQQGHTAA KCQNPVDCRN CRHRGQPSGH YMLSNACPIY GALLARVQAR H
 
 
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