Y1R1_DROME
ID Y1R1_DROME Reviewed; 471 AA.
AC P16424;
DT 01-AUG-1990, integrated into UniProtKB/Swiss-Prot.
DT 01-AUG-1990, sequence version 1.
DT 25-MAY-2022, entry version 84.
DE RecName: Full=Uncharacterized 50 kDa protein in type I retrotransposable element R1DM;
DE AltName: Full=ORF 1;
GN Name=R1A1-element\ORF1;
OS Drosophila melanogaster (Fruit fly).
OC Eukaryota; Metazoa; Ecdysozoa; Arthropoda; Hexapoda; Insecta; Pterygota;
OC Neoptera; Endopterygota; Diptera; Brachycera; Muscomorpha; Ephydroidea;
OC Drosophilidae; Drosophila; Sophophora.
OX NCBI_TaxID=7227;
RN [1]
RP NUCLEOTIDE SEQUENCE [GENOMIC DNA].
RC STRAIN=Oregon-R;
RX PubMed=1690812; DOI=10.1016/0022-2836(90)90303-4;
RA Jakubczak J.L., Xiong Y., Eickbush T.H.;
RT "Type I (R1) and type II (R2) ribosomal DNA insertions of Drosophila
RT melanogaster are retrotransposable elements closely related to those of
RT Bombyx mori.";
RL J. Mol. Biol. 212:37-52(1990).
CC -!- SIMILARITY: To corresponding ORF of B.mori (R1BM). {ECO:0000305}.
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DR EMBL; X51968; CAA36226.1; -; Genomic_DNA.
DR PIR; S09110; S09110.
DR AlphaFoldDB; P16424; -.
DR FlyBase; FBgn0044825; R1A1-element\ORF1.
DR PRO; PR:P16424; -.
DR GO; GO:0003676; F:nucleic acid binding; IEA:InterPro.
DR GO; GO:0008270; F:zinc ion binding; IEA:InterPro.
DR InterPro; IPR001878; Znf_CCHC.
DR InterPro; IPR036875; Znf_CCHC_sf.
DR SMART; SM00343; ZnF_C2HC; 2.
DR SUPFAM; SSF57756; SSF57756; 1.
DR PROSITE; PS50158; ZF_CCHC; 1.
PE 4: Predicted;
KW Metal-binding; Repeat; Transposable element; Zinc; Zinc-finger.
FT CHAIN 1..471
FT /note="Uncharacterized 50 kDa protein in type I
FT retrotransposable element R1DM"
FT /id="PRO_0000066075"
FT ZN_FING 397..414
FT /note="CCHC-type 1"
FT /evidence="ECO:0000255|PROSITE-ProRule:PRU00047"
FT ZN_FING 417..434
FT /note="CCHC-type 2"
FT /evidence="ECO:0000255|PROSITE-ProRule:PRU00047"
FT REGION 13..57
FT /note="Disordered"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT REGION 438..457
FT /note="Gag-like cysteine motif"
FT COMPBIAS 21..39
FT /note="Polar residues"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
SQ SEQUENCE 471 AA; 50380 MW; 929731215DC2AF8A CRC64;
PVSASIRLLD SSKGGATIGA TPMESDSSVS ALSGSSASKV SRRGRRRSHL ASKSSAPTQA
KLVALASNGV PEPVGVLEEA FSSLEDARAA TSNAANDAAP PAAAPAVDHT VAPDVSTAAK
IAATTATAAT AAARAGQAAM MAELSATQRM VRNSFRSLGG VDTEELSCAI SRYDELVMAL
MLRCGELETR LAMPPPPPPP SKANTTAANA PQMPQVAPIA APRTTKVRET WSAVVKCDDP
ALSGKAIAEK VRTMVAPSLG VRVHEVRELP SRWWCDHSYS SVGELQKVMA SKRFAELGLN
VARNAAEKPK VIVYDVDTAI GPEEFMQELH ENNFDSEMTL AQFKKSVHLV TKAWSATDGA
TVNVTLEVDD RAMAKLDVGR VYIKWFSFRC RSQVRTYACH RCVGFDHKVS ECRQKESVCR
QCGQQGHTAA KCQNPVDCRN CRHRGQPSGH YMLSNACPIY GALLARVQAR H