Y2172_ARATH
ID Y2172_ARATH Reviewed; 313 AA.
AC Q8RV83;
DT 26-MAY-2009, integrated into UniProtKB/Swiss-Prot.
DT 01-JUN-2002, sequence version 1.
DT 03-AUG-2022, entry version 104.
DE RecName: Full=B3 domain-containing protein At2g31720;
DE AltName: Full=Protein AUXIN RESPONSE FACTOR 70;
GN Name=ARF70; OrderedLocusNames=At2g31720; ORFNames=T9H9.24;
OS Arabidopsis thaliana (Mouse-ear cress).
OC Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
OC Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae;
OC rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis.
OX NCBI_TaxID=3702;
RN [1]
RP NUCLEOTIDE SEQUENCE [MRNA].
RC STRAIN=cv. Columbia;
RA Sessa G., Carabelli M., Ciarbelli A.R., Ruzza V., Steindler C., Ruberti I.;
RT "Nucleotide sequence of the putative Arabidopsis ARF70.";
RL Submitted (APR-2002) to the EMBL/GenBank/DDBJ databases.
RN [2]
RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC STRAIN=cv. Columbia;
RX PubMed=10617197; DOI=10.1038/45471;
RA Lin X., Kaul S., Rounsley S.D., Shea T.P., Benito M.-I., Town C.D.,
RA Fujii C.Y., Mason T.M., Bowman C.L., Barnstead M.E., Feldblyum T.V.,
RA Buell C.R., Ketchum K.A., Lee J.J., Ronning C.M., Koo H.L., Moffat K.S.,
RA Cronin L.A., Shen M., Pai G., Van Aken S., Umayam L., Tallon L.J.,
RA Gill J.E., Adams M.D., Carrera A.J., Creasy T.H., Goodman H.M.,
RA Somerville C.R., Copenhaver G.P., Preuss D., Nierman W.C., White O.,
RA Eisen J.A., Salzberg S.L., Fraser C.M., Venter J.C.;
RT "Sequence and analysis of chromosome 2 of the plant Arabidopsis thaliana.";
RL Nature 402:761-768(1999).
RN [3]
RP GENOME REANNOTATION.
RC STRAIN=cv. Columbia;
RX PubMed=27862469; DOI=10.1111/tpj.13415;
RA Cheng C.Y., Krishnakumar V., Chan A.P., Thibaud-Nissen F., Schobel S.,
RA Town C.D.;
RT "Araport11: a complete reannotation of the Arabidopsis thaliana reference
RT genome.";
RL Plant J. 89:789-804(2017).
RN [4]
RP NUCLEOTIDE SEQUENCE [LARGE SCALE MRNA].
RC STRAIN=cv. Columbia;
RA Quinitio C., Chen H., Kim C.J., Shinn P., Ecker J.R.;
RT "Arabidopsis ORF clones.";
RL Submitted (JUL-2006) to the EMBL/GenBank/DDBJ databases.
RN [5]
RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RA Fujita M., Mizukado S., Seki M., Shinozaki K., Mitsuda N., Takiguchi Y.,
RA Takagi M.;
RT "ORF cloning and analysis of Arabidopsis transcription factor genes.";
RL Submitted (MAR-2009) to the EMBL/GenBank/DDBJ databases.
RN [6]
RP GENE FAMILY.
RX PubMed=18986826; DOI=10.1016/j.tplants.2008.09.006;
RA Swaminathan K., Peterson K., Jack T.;
RT "The plant B3 superfamily.";
RL Trends Plant Sci. 13:647-655(2008).
CC -!- INTERACTION:
CC Q8RV83; P93830: IAA17; NbExp=3; IntAct=EBI-15392261, EBI-632243;
CC Q8RV83; Q9FNZ4: NIMIN-3; NbExp=4; IntAct=EBI-15392261, EBI-541115;
CC -!- SUBCELLULAR LOCATION: Nucleus {ECO:0000255|PROSITE-ProRule:PRU00326}.
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DR EMBL; AJ441118; CAD29617.1; -; mRNA.
DR EMBL; AC007071; AAM15380.1; -; Genomic_DNA.
DR EMBL; CP002685; AEC08576.1; -; Genomic_DNA.
DR EMBL; BT026082; ABG48438.1; -; mRNA.
DR EMBL; AB493574; BAH30412.1; -; Genomic_DNA.
DR PIR; C84724; C84724.
DR RefSeq; NP_180730.1; NM_128729.1.
DR AlphaFoldDB; Q8RV83; -.
DR BioGRID; 3075; 10.
DR IntAct; Q8RV83; 9.
DR STRING; 3702.AT2G31720.1; -.
DR PaxDb; Q8RV83; -.
DR PRIDE; Q8RV83; -.
DR EnsemblPlants; AT2G31720.1; AT2G31720.1; AT2G31720.
DR GeneID; 817728; -.
DR Gramene; AT2G31720.1; AT2G31720.1; AT2G31720.
DR KEGG; ath:AT2G31720; -.
DR Araport; AT2G31720; -.
DR TAIR; locus:2065918; AT2G31720.
DR HOGENOM; CLU_889509_0_0_1; -.
DR InParanoid; Q8RV83; -.
DR OMA; CHLESKR; -.
DR OrthoDB; 1462846at2759; -.
DR PhylomeDB; Q8RV83; -.
DR PRO; PR:Q8RV83; -.
DR Proteomes; UP000006548; Chromosome 2.
DR ExpressionAtlas; Q8RV83; differential.
DR Genevisible; Q8RV83; AT.
DR GO; GO:0005634; C:nucleus; IEA:UniProtKB-SubCell.
DR GO; GO:0003677; F:DNA binding; IEA:UniProtKB-KW.
DR Gene3D; 2.40.330.10; -; 1.
DR InterPro; IPR005508; At2g31720-like.
DR InterPro; IPR003340; B3_DNA-bd.
DR InterPro; IPR015300; DNA-bd_pseudobarrel_sf.
DR PANTHER; PTHR31541; PTHR31541; 1.
DR Pfam; PF03754; DUF313; 1.
DR SUPFAM; SSF101936; SSF101936; 1.
DR PROSITE; PS50863; B3; 1.
PE 1: Evidence at protein level;
KW DNA-binding; Nucleus; Reference proteome; Transcription;
KW Transcription regulation.
FT CHAIN 1..313
FT /note="B3 domain-containing protein At2g31720"
FT /id="PRO_0000375129"
FT DNA_BIND 169..267
FT /note="TF-B3"
FT /evidence="ECO:0000255|PROSITE-ProRule:PRU00326"
FT REGION 80..110
FT /note="Disordered"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT COMPBIAS 85..104
FT /note="Polar residues"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
SQ SEQUENCE 313 AA; 35844 MW; 2716D5DEB872BFC4 CRC64;
MVRGDDQLNG LQGGKRALDI LCVATERTVS AFAYEEIGET STEGDKRRER LRRLRRLINY
SLSTTMNSSL SKRLKIDECK NQDPEQNPNR VASSPSSCHL ESKRPQKVVS NKPVRNRKPV
IVTDEDRTPT EWLIDVMREV NGMDAKLIFV KVLPNSDVDE LQTRLMMPWK QILDMDFLNE
EELEKIDRHH KKISASDKGA DVIVVNSKGL QRKLKLKRWD MTSTSNYVLG LGWNKVVTDN
ILQRGTRLRI WSFHSPDMLF FAFVLSDPDP APTECLNLLA KLCEETTCLE ALQEANRMSS
LVSDTELDLE LRL