Y2190_CLOBK
ID Y2190_CLOBK Reviewed; 110 AA.
AC B1II81;
DT 24-MAR-2009, integrated into UniProtKB/Swiss-Prot.
DT 29-APR-2008, sequence version 1.
DT 25-MAY-2022, entry version 73.
DE RecName: Full=UPF0122 protein CLD_2190 {ECO:0000255|HAMAP-Rule:MF_00245};
GN OrderedLocusNames=CLD_2190;
OS Clostridium botulinum (strain Okra / Type B1).
OC Bacteria; Firmicutes; Clostridia; Eubacteriales; Clostridiaceae;
OC Clostridium.
OX NCBI_TaxID=498213;
RN [1]
RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC STRAIN=Okra / Type B1;
RX PubMed=18060065; DOI=10.1371/journal.pone.0001271;
RA Smith T.J., Hill K.K., Foley B.T., Detter J.C., Munk A.C., Bruce D.C.,
RA Doggett N.A., Smith L.A., Marks J.D., Xie G., Brettin T.S.;
RT "Analysis of the neurotoxin complex genes in Clostridium botulinum A1-A4
RT and B1 strains: BoNT/A3, /Ba4 and /B1 clusters are located within
RT plasmids.";
RL PLoS ONE 2:E1271-E1271(2007).
CC -!- FUNCTION: Might take part in the signal recognition particle (SRP)
CC pathway. This is inferred from the conservation of its genetic
CC proximity to ftsY/ffh. May be a regulatory protein. {ECO:0000255|HAMAP-
CC Rule:MF_00245}.
CC -!- SIMILARITY: Belongs to the UPF0122 family. {ECO:0000255|HAMAP-
CC Rule:MF_00245}.
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DR EMBL; CP000939; ACA44246.1; -; Genomic_DNA.
DR RefSeq; WP_003393779.1; NC_010516.1.
DR AlphaFoldDB; B1II81; -.
DR SMR; B1II81; -.
DR EnsemblBacteria; ACA44246; ACA44246; CLD_2190.
DR GeneID; 5186705; -.
DR KEGG; cbb:CLD_2190; -.
DR HOGENOM; CLU_129218_0_1_9; -.
DR OMA; SIQEWQE; -.
DR Proteomes; UP000008541; Chromosome.
DR Gene3D; 1.10.10.10; -; 1.
DR HAMAP; MF_00245; UPF0122; 1.
DR InterPro; IPR013324; RNA_pol_sigma_r3/r4-like.
DR InterPro; IPR007394; UPF0122.
DR InterPro; IPR036388; WH-like_DNA-bd_sf.
DR PANTHER; PTHR40083; PTHR40083; 1.
DR Pfam; PF04297; UPF0122; 1.
DR SUPFAM; SSF88659; SSF88659; 1.
PE 3: Inferred from homology;
FT CHAIN 1..110
FT /note="UPF0122 protein CLD_2190"
FT /id="PRO_1000100810"
SQ SEQUENCE 110 AA; 13224 MW; 2548345383C0178B CRC64;
MEEIVEMSLL LDFYGSLLTE KQNKIMDLYY NNDYSLKEIS ELTNTSRQAV HDIVKRCHKA
LLQYEEKLHM MERFINLENS KEKLLNMLNK VTKENIKEID HIKKYIIDNI