Y2234_SHELP
ID Y2234_SHELP Reviewed; 109 AA.
AC A3QF52;
DT 15-JAN-2008, integrated into UniProtKB/Swiss-Prot.
DT 03-APR-2007, sequence version 1.
DT 25-MAY-2022, entry version 93.
DE RecName: Full=Nucleoid-associated protein Shew_2234 {ECO:0000255|HAMAP-Rule:MF_00274};
GN OrderedLocusNames=Shew_2234;
OS Shewanella loihica (strain ATCC BAA-1088 / PV-4).
OC Bacteria; Proteobacteria; Gammaproteobacteria; Alteromonadales;
OC Shewanellaceae; Shewanella.
OX NCBI_TaxID=323850;
RN [1]
RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC STRAIN=ATCC BAA-1088 / PV-4;
RG US DOE Joint Genome Institute;
RA Copeland A., Lucas S., Lapidus A., Barry K., Detter J.C.,
RA Glavina del Rio T., Hammon N., Israni S., Dalin E., Tice H., Pitluck S.,
RA Chain P., Malfatti S., Shin M., Vergez L., Schmutz J., Larimer F., Land M.,
RA Hauser L., Kyrpides N., Mikhailova N., Romine M.F., Serres G.,
RA Fredrickson J., Tiedje J., Richardson P.;
RT "Complete sequence of Shewanella loihica PV-4.";
RL Submitted (MAR-2007) to the EMBL/GenBank/DDBJ databases.
CC -!- FUNCTION: Binds to DNA and alters its conformation. May be involved in
CC regulation of gene expression, nucleoid organization and DNA
CC protection. {ECO:0000255|HAMAP-Rule:MF_00274}.
CC -!- SUBUNIT: Homodimer. {ECO:0000255|HAMAP-Rule:MF_00274}.
CC -!- SUBCELLULAR LOCATION: Cytoplasm, nucleoid {ECO:0000255|HAMAP-
CC Rule:MF_00274}.
CC -!- SIMILARITY: Belongs to the YbaB/EbfC family. {ECO:0000255|HAMAP-
CC Rule:MF_00274}.
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DR EMBL; CP000606; ABO24100.1; -; Genomic_DNA.
DR RefSeq; WP_011866032.1; NC_009092.1.
DR AlphaFoldDB; A3QF52; -.
DR SMR; A3QF52; -.
DR STRING; 323850.Shew_2234; -.
DR PRIDE; A3QF52; -.
DR EnsemblBacteria; ABO24100; ABO24100; Shew_2234.
DR KEGG; slo:Shew_2234; -.
DR eggNOG; COG0718; Bacteria.
DR HOGENOM; CLU_140930_0_0_6; -.
DR OMA; MGNMMKQ; -.
DR OrthoDB; 1883809at2; -.
DR Proteomes; UP000001558; Chromosome.
DR GO; GO:0043590; C:bacterial nucleoid; IEA:UniProtKB-UniRule.
DR GO; GO:0005737; C:cytoplasm; IEA:UniProtKB-UniRule.
DR GO; GO:0003677; F:DNA binding; IEA:UniProtKB-UniRule.
DR Gene3D; 3.30.1310.10; -; 1.
DR HAMAP; MF_00274; DNA_YbaB_EbfC; 1.
DR InterPro; IPR036894; YbaB-like_sf.
DR InterPro; IPR004401; YbaB/EbfC.
DR PANTHER; PTHR33449; PTHR33449; 1.
DR Pfam; PF02575; YbaB_DNA_bd; 1.
DR PIRSF; PIRSF004555; UCP004555; 1.
DR SUPFAM; SSF82607; SSF82607; 1.
DR TIGRFAMs; TIGR00103; DNA_YbaB_EbfC; 1.
PE 3: Inferred from homology;
KW Cytoplasm; DNA-binding; Reference proteome.
FT CHAIN 1..109
FT /note="Nucleoid-associated protein Shew_2234"
FT /id="PRO_1000003822"
FT REGION 87..109
FT /note="Disordered"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
SQ SEQUENCE 109 AA; 11877 MW; 3D9357D6203FC5DE CRC64;
MFGKGGMGNL MKQAQMMQDK MAKVQEEIAR MEVTGEAGAG LVKVTMTGSH SVRKVEIDPS
LLEDDKEMLE DLIAAACNDA ARRVEESQKE KMAEVTGGMQ LPPGMKMPF