Y2318_METBF
ID Y2318_METBF Reviewed; 327 AA.
AC Q46A50;
DT 31-OCT-2006, integrated into UniProtKB/Swiss-Prot.
DT 13-SEP-2005, sequence version 1.
DT 25-MAY-2022, entry version 102.
DE RecName: Full=Putative HTH-type transcriptional regulatory protein Mbar_A2318 {ECO:0000255|HAMAP-Rule:MF_00584};
GN OrderedLocusNames=Mbar_A2318;
OS Methanosarcina barkeri (strain Fusaro / DSM 804).
OC Archaea; Euryarchaeota; Stenosarchaea group; Methanomicrobia;
OC Methanosarcinales; Methanosarcinaceae; Methanosarcina.
OX NCBI_TaxID=269797;
RN [1]
RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC STRAIN=Fusaro / DSM 804;
RX PubMed=16980466; DOI=10.1128/jb.00810-06;
RA Maeder D.L., Anderson I., Brettin T.S., Bruce D.C., Gilna P., Han C.S.,
RA Lapidus A., Metcalf W.W., Saunders E., Tapia R., Sowers K.R.;
RT "The Methanosarcina barkeri genome: comparative analysis with
RT Methanosarcina acetivorans and Methanosarcina mazei reveals extensive
RT rearrangement within methanosarcinal genomes.";
RL J. Bacteriol. 188:7922-7931(2006).
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DR EMBL; CP000099; AAZ71242.1; -; Genomic_DNA.
DR RefSeq; WP_011307288.1; NC_007355.1.
DR AlphaFoldDB; Q46A50; -.
DR SMR; Q46A50; -.
DR STRING; 269797.Mbar_A2318; -.
DR EnsemblBacteria; AAZ71242; AAZ71242; Mbar_A2318.
DR GeneID; 3625226; -.
DR KEGG; mba:Mbar_A2318; -.
DR eggNOG; arCOG04152; Archaea.
DR HOGENOM; CLU_075726_0_0_2; -.
DR OMA; PGVVYFR; -.
DR OrthoDB; 76134at2157; -.
DR GO; GO:0003677; F:DNA binding; IEA:UniProtKB-KW.
DR GO; GO:0003700; F:DNA-binding transcription factor activity; IEA:UniProtKB-UniRule.
DR CDD; cd00093; HTH_XRE; 1.
DR Gene3D; 1.10.260.40; -; 1.
DR HAMAP; MF_00584; HTH_type_cro_C1; 1.
DR InterPro; IPR020886; Arc_TR_HTH.
DR InterPro; IPR001387; Cro/C1-type_HTH.
DR InterPro; IPR010982; Lambda_DNA-bd_dom_sf.
DR Pfam; PF01381; HTH_3; 1.
DR SMART; SM00530; HTH_XRE; 1.
DR SUPFAM; SSF47413; SSF47413; 1.
DR PROSITE; PS50943; HTH_CROC1; 1.
PE 3: Inferred from homology;
KW DNA-binding; Transcription; Transcription regulation.
FT CHAIN 1..327
FT /note="Putative HTH-type transcriptional regulatory protein
FT Mbar_A2318"
FT /id="PRO_0000259359"
FT DOMAIN 132..190
FT /note="HTH cro/C1-type"
FT /evidence="ECO:0000255|HAMAP-Rule:MF_00584"
FT DNA_BIND 143..162
FT /note="H-T-H motif"
FT /evidence="ECO:0000255|HAMAP-Rule:MF_00584"
SQ SEQUENCE 327 AA; 36538 MW; 502C11BF1753E2B6 CRC64;
MTKEVLIHQI IDVLARAGFA LSDRCNIRPR SFDVAARKDE TLLLCKVLFN IDGLNEETAR
EMKYLAEYLG GSAIVVGAKT RDQMLEDSVV YMRYDILALN VQTLYDYFIE NVPPLVSAAP
GGLYVSIEGD ILKKARMGQS MSLGTLASMV GVSRRTISKY EEEGMDASID VVLQLEDIFG
VELAKPINIL KSCGSRKPRK KAESRTETQE KPYTLLPEDL ILNTISMLGY DVLPTTQAPF
KAISRDKSSV ILTGVSEFNT TVVKRAHLMS SISCVTETQS VFIINGHSKI KSVENTVMIE
KKELDKISDS QELLNFIEER RETHDEK