Y2467_ARATH
ID Y2467_ARATH Reviewed; 251 AA.
AC Q9SJ98;
DT 21-SEP-2011, integrated into UniProtKB/Swiss-Prot.
DT 01-MAY-2000, sequence version 1.
DT 03-AUG-2022, entry version 98.
DE RecName: Full=B3 domain-containing protein At2g24670;
GN OrderedLocusNames=At2g24670; ORFNames=F25P17.3;
OS Arabidopsis thaliana (Mouse-ear cress).
OC Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
OC Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae;
OC rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis.
OX NCBI_TaxID=3702;
RN [1]
RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC STRAIN=cv. Columbia;
RX PubMed=10617197; DOI=10.1038/45471;
RA Lin X., Kaul S., Rounsley S.D., Shea T.P., Benito M.-I., Town C.D.,
RA Fujii C.Y., Mason T.M., Bowman C.L., Barnstead M.E., Feldblyum T.V.,
RA Buell C.R., Ketchum K.A., Lee J.J., Ronning C.M., Koo H.L., Moffat K.S.,
RA Cronin L.A., Shen M., Pai G., Van Aken S., Umayam L., Tallon L.J.,
RA Gill J.E., Adams M.D., Carrera A.J., Creasy T.H., Goodman H.M.,
RA Somerville C.R., Copenhaver G.P., Preuss D., Nierman W.C., White O.,
RA Eisen J.A., Salzberg S.L., Fraser C.M., Venter J.C.;
RT "Sequence and analysis of chromosome 2 of the plant Arabidopsis thaliana.";
RL Nature 402:761-768(1999).
RN [2]
RP GENOME REANNOTATION.
RC STRAIN=cv. Columbia;
RX PubMed=27862469; DOI=10.1111/tpj.13415;
RA Cheng C.Y., Krishnakumar V., Chan A.P., Thibaud-Nissen F., Schobel S.,
RA Town C.D.;
RT "Araport11: a complete reannotation of the Arabidopsis thaliana reference
RT genome.";
RL Plant J. 89:789-804(2017).
RN [3]
RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RA Fujita M., Mizukado S., Seki M., Shinozaki K., Mitsuda N., Takiguchi Y.,
RA Takagi M.;
RT "ORF cloning and analysis of Arabidopsis transcription factor genes.";
RL Submitted (MAR-2009) to the EMBL/GenBank/DDBJ databases.
RN [4]
RP NUCLEOTIDE SEQUENCE [LARGE SCALE MRNA] OF 1-208.
RC STRAIN=cv. Columbia;
RX PubMed=16244158; DOI=10.1104/pp.105.063479;
RA Xiao Y.-L., Smith S.R., Ishmael N., Redman J.C., Kumar N., Monaghan E.L.,
RA Ayele M., Haas B.J., Wu H.C., Town C.D.;
RT "Analysis of the cDNAs of hypothetical genes on Arabidopsis chromosome 2
RT reveals numerous transcript variants.";
RL Plant Physiol. 139:1323-1337(2005).
RN [5]
RP GENE FAMILY.
RX PubMed=18986826; DOI=10.1016/j.tplants.2008.09.006;
RA Swaminathan K., Peterson K., Jack T.;
RT "The plant B3 superfamily.";
RL Trends Plant Sci. 13:647-655(2008).
CC -!- SUBCELLULAR LOCATION: Nucleus {ECO:0000250}.
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DR EMBL; AC006954; AAD23882.1; -; Genomic_DNA.
DR EMBL; CP002685; AEC07611.1; -; Genomic_DNA.
DR EMBL; AB493563; BAH30401.1; -; Genomic_DNA.
DR EMBL; AY464575; -; NOT_ANNOTATED_CDS; mRNA.
DR PIR; E84639; E84639.
DR RefSeq; NP_180043.1; NM_128028.2.
DR AlphaFoldDB; Q9SJ98; -.
DR STRING; 3702.AT2G24670.1; -.
DR PaxDb; Q9SJ98; -.
DR PRIDE; Q9SJ98; -.
DR EnsemblPlants; AT2G24670.1; AT2G24670.1; AT2G24670.
DR GeneID; 817003; -.
DR Gramene; AT2G24670.1; AT2G24670.1; AT2G24670.
DR KEGG; ath:AT2G24670; -.
DR Araport; AT2G24670; -.
DR TAIR; locus:2046648; AT2G24670.
DR HOGENOM; CLU_1108394_0_0_1; -.
DR InParanoid; Q9SJ98; -.
DR OMA; VMESKSH; -.
DR OrthoDB; 1142034at2759; -.
DR PhylomeDB; Q9SJ98; -.
DR PRO; PR:Q9SJ98; -.
DR Proteomes; UP000006548; Chromosome 2.
DR ExpressionAtlas; Q9SJ98; differential.
DR GO; GO:0005634; C:nucleus; IEA:UniProtKB-SubCell.
DR GO; GO:0003677; F:DNA binding; IEA:UniProtKB-KW.
DR Gene3D; 2.40.330.10; -; 1.
DR InterPro; IPR005508; At2g31720-like.
DR InterPro; IPR015300; DNA-bd_pseudobarrel_sf.
DR PANTHER; PTHR31541; PTHR31541; 1.
DR Pfam; PF03754; DUF313; 1.
DR SUPFAM; SSF101936; SSF101936; 1.
PE 2: Evidence at transcript level;
KW DNA-binding; Nucleus; Reference proteome; Transcription;
KW Transcription regulation.
FT CHAIN 1..251
FT /note="B3 domain-containing protein At2g24670"
FT /id="PRO_0000412847"
FT DNA_BIND 153..249
FT /note="TF-B3"
FT REGION 48..111
FT /note="Disordered"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT COMPBIAS 56..78
FT /note="Basic and acidic residues"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT COMPBIAS 88..102
FT /note="Basic and acidic residues"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT CONFLICT 127
FT /note="D -> G (in Ref. 4; AY464575)"
FT /evidence="ECO:0000305"
SQ SEQUENCE 251 AA; 29040 MW; 2B779FEBD267B042 CRC64;
MIFKKEVSKE DVECVETLLM MSNSKPTREE YNKLQLCILR RNKSSTITTP STVMESKSHI
HDHSLRESPT RRSRNRHDLP PMSPPMEQRK SKKAKRSTDA SSSKTREPTP GWLISLMRSK
NGGDVEDNSK KIIDKELFQT DVDPHQSRLS IPVSQIVELE FLNHEEKRAI EEDANRVRKE
GVDAILVDSH LREFPVNLRL RDMRGILLYN LVAGWNQVVT DCLLEENTNI RLWSFHADDT
LYFALVPLYA N