Y2531_ARATH
ID Y2531_ARATH Reviewed; 288 AA.
AC Q5PNU4; O82163; Q8H0U7;
DT 26-MAY-2009, integrated into UniProtKB/Swiss-Prot.
DT 04-JAN-2005, sequence version 1.
DT 03-AUG-2022, entry version 92.
DE RecName: Full=B3 domain-containing protein At2g35310;
GN OrderedLocusNames=At2g35310; ORFNames=T4C15.2;
OS Arabidopsis thaliana (Mouse-ear cress).
OC Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
OC Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae;
OC rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis.
OX NCBI_TaxID=3702;
RN [1]
RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC STRAIN=cv. Columbia;
RX PubMed=10617197; DOI=10.1038/45471;
RA Lin X., Kaul S., Rounsley S.D., Shea T.P., Benito M.-I., Town C.D.,
RA Fujii C.Y., Mason T.M., Bowman C.L., Barnstead M.E., Feldblyum T.V.,
RA Buell C.R., Ketchum K.A., Lee J.J., Ronning C.M., Koo H.L., Moffat K.S.,
RA Cronin L.A., Shen M., Pai G., Van Aken S., Umayam L., Tallon L.J.,
RA Gill J.E., Adams M.D., Carrera A.J., Creasy T.H., Goodman H.M.,
RA Somerville C.R., Copenhaver G.P., Preuss D., Nierman W.C., White O.,
RA Eisen J.A., Salzberg S.L., Fraser C.M., Venter J.C.;
RT "Sequence and analysis of chromosome 2 of the plant Arabidopsis thaliana.";
RL Nature 402:761-768(1999).
RN [2]
RP GENOME REANNOTATION.
RC STRAIN=cv. Columbia;
RX PubMed=27862469; DOI=10.1111/tpj.13415;
RA Cheng C.Y., Krishnakumar V., Chan A.P., Thibaud-Nissen F., Schobel S.,
RA Town C.D.;
RT "Araport11: a complete reannotation of the Arabidopsis thaliana reference
RT genome.";
RL Plant J. 89:789-804(2017).
RN [3]
RP NUCLEOTIDE SEQUENCE [LARGE SCALE MRNA].
RC STRAIN=cv. Columbia;
RX PubMed=14593172; DOI=10.1126/science.1088305;
RA Yamada K., Lim J., Dale J.M., Chen H., Shinn P., Palm C.J., Southwick A.M.,
RA Wu H.C., Kim C.J., Nguyen M., Pham P.K., Cheuk R.F., Karlin-Newmann G.,
RA Liu S.X., Lam B., Sakano H., Wu T., Yu G., Miranda M., Quach H.L.,
RA Tripp M., Chang C.H., Lee J.M., Toriumi M.J., Chan M.M., Tang C.C.,
RA Onodera C.S., Deng J.M., Akiyama K., Ansari Y., Arakawa T., Banh J.,
RA Banno F., Bowser L., Brooks S.Y., Carninci P., Chao Q., Choy N., Enju A.,
RA Goldsmith A.D., Gurjal M., Hansen N.F., Hayashizaki Y., Johnson-Hopson C.,
RA Hsuan V.W., Iida K., Karnes M., Khan S., Koesema E., Ishida J., Jiang P.X.,
RA Jones T., Kawai J., Kamiya A., Meyers C., Nakajima M., Narusaka M.,
RA Seki M., Sakurai T., Satou M., Tamse R., Vaysberg M., Wallender E.K.,
RA Wong C., Yamamura Y., Yuan S., Shinozaki K., Davis R.W., Theologis A.,
RA Ecker J.R.;
RT "Empirical analysis of transcriptional activity in the Arabidopsis
RT genome.";
RL Science 302:842-846(2003).
RN [4]
RP NUCLEOTIDE SEQUENCE [LARGE SCALE MRNA].
RC STRAIN=cv. Columbia;
RA Kim C.J., Chen H., Cheuk R.F., Shinn P., Ecker J.R.;
RT "Arabidopsis ORF clones.";
RL Submitted (FEB-2005) to the EMBL/GenBank/DDBJ databases.
RN [5]
RP GENE FAMILY.
RX PubMed=18986826; DOI=10.1016/j.tplants.2008.09.006;
RA Swaminathan K., Peterson K., Jack T.;
RT "The plant B3 superfamily.";
RL Trends Plant Sci. 13:647-655(2008).
CC -!- SUBCELLULAR LOCATION: Nucleus {ECO:0000255|PROSITE-ProRule:PRU00326}.
CC -!- SEQUENCE CAUTION:
CC Sequence=AAC61807.1; Type=Erroneous gene model prediction; Evidence={ECO:0000305};
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DR EMBL; AC004667; AAC61807.1; ALT_SEQ; Genomic_DNA.
DR EMBL; CP002685; AEC09092.1; -; Genomic_DNA.
DR EMBL; BT002032; AAN72043.1; -; mRNA.
DR EMBL; BT020353; AAV85708.1; -; mRNA.
DR EMBL; BT021085; AAX12855.1; -; mRNA.
DR PIR; A84767; A84767.
DR RefSeq; NP_181074.2; NM_129083.4.
DR AlphaFoldDB; Q5PNU4; -.
DR SMR; Q5PNU4; -.
DR BioGRID; 3444; 2.
DR IntAct; Q5PNU4; 2.
DR STRING; 3702.AT2G35310.1; -.
DR PaxDb; Q5PNU4; -.
DR PRIDE; Q5PNU4; -.
DR EnsemblPlants; AT2G35310.1; AT2G35310.1; AT2G35310.
DR GeneID; 818098; -.
DR Gramene; AT2G35310.1; AT2G35310.1; AT2G35310.
DR KEGG; ath:AT2G35310; -.
DR Araport; AT2G35310; -.
DR TAIR; locus:2063434; AT2G35310.
DR HOGENOM; CLU_083136_0_0_1; -.
DR InParanoid; Q5PNU4; -.
DR OMA; FWRSSEC; -.
DR OrthoDB; 1428653at2759; -.
DR PhylomeDB; Q5PNU4; -.
DR PRO; PR:Q5PNU4; -.
DR Proteomes; UP000006548; Chromosome 2.
DR ExpressionAtlas; Q5PNU4; baseline and differential.
DR Genevisible; Q5PNU4; AT.
DR GO; GO:0005634; C:nucleus; IEA:UniProtKB-SubCell.
DR GO; GO:0003677; F:DNA binding; IEA:UniProtKB-KW.
DR CDD; cd10017; B3_DNA; 1.
DR Gene3D; 2.40.330.10; -; 2.
DR InterPro; IPR003340; B3_DNA-bd.
DR InterPro; IPR015300; DNA-bd_pseudobarrel_sf.
DR Pfam; PF02362; B3; 1.
DR SMART; SM01019; B3; 2.
DR SUPFAM; SSF101936; SSF101936; 2.
DR PROSITE; PS50863; B3; 2.
PE 2: Evidence at transcript level;
KW DNA-binding; Nucleus; Reference proteome; Repeat; Transcription;
KW Transcription regulation.
FT CHAIN 1..288
FT /note="B3 domain-containing protein At2g35310"
FT /id="PRO_0000375133"
FT DNA_BIND 19..114
FT /note="TF-B3 1"
FT /evidence="ECO:0000255|PROSITE-ProRule:PRU00326"
FT DNA_BIND 196..288
FT /note="TF-B3 2"
FT /evidence="ECO:0000255|PROSITE-ProRule:PRU00326"
FT CONFLICT 118
FT /note="M -> V (in Ref. 3; AAN72043)"
FT /evidence="ECO:0000305"
SQ SEQUENCE 288 AA; 33214 MW; 36CCA0AE3A5601B2 CRC64;
MARNSDNDMC KEERKRESFF KVLQRVDISS ENMRALPYDF VRSFSNNELS RKMKIKARWG
SSWEVEICKN PRFYFMEKSG WEKFVSDNAL GASEFLTFTH KGNMRFTVNI FMQDGKEMLQ
PPQSMSFMAS SRPPKREQGI PSLATTIAAE SNGGGNYKRK LNFEKKKAEE SHNSKRTDKV
FSVQRESAGA SSSSVAEFSM FIKKSYLIYM WFPKSVQSIH MPKQRTIFKI HHPNMKKSWN
VVYVVSGTKS SFSAGWKGLA QEYPLAVGDT CKFSFIKQHE LILFVSKP
