Y2741_ARATH
ID Y2741_ARATH Reviewed; 257 AA.
AC Q9XIP5; F4IFU0;
DT 21-SEP-2011, integrated into UniProtKB/Swiss-Prot.
DT 21-SEP-2011, sequence version 2.
DT 03-AUG-2022, entry version 100.
DE RecName: Full=Putative B3 domain-containing protein At2g27410;
GN OrderedLocusNames=At2g27410; ORFNames=F10A12, F12K2.1;
OS Arabidopsis thaliana (Mouse-ear cress).
OC Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
OC Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae;
OC rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis.
OX NCBI_TaxID=3702;
RN [1]
RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC STRAIN=cv. Columbia;
RX PubMed=10617197; DOI=10.1038/45471;
RA Lin X., Kaul S., Rounsley S.D., Shea T.P., Benito M.-I., Town C.D.,
RA Fujii C.Y., Mason T.M., Bowman C.L., Barnstead M.E., Feldblyum T.V.,
RA Buell C.R., Ketchum K.A., Lee J.J., Ronning C.M., Koo H.L., Moffat K.S.,
RA Cronin L.A., Shen M., Pai G., Van Aken S., Umayam L., Tallon L.J.,
RA Gill J.E., Adams M.D., Carrera A.J., Creasy T.H., Goodman H.M.,
RA Somerville C.R., Copenhaver G.P., Preuss D., Nierman W.C., White O.,
RA Eisen J.A., Salzberg S.L., Fraser C.M., Venter J.C.;
RT "Sequence and analysis of chromosome 2 of the plant Arabidopsis thaliana.";
RL Nature 402:761-768(1999).
RN [2]
RP GENOME REANNOTATION.
RC STRAIN=cv. Columbia;
RX PubMed=27862469; DOI=10.1111/tpj.13415;
RA Cheng C.Y., Krishnakumar V., Chan A.P., Thibaud-Nissen F., Schobel S.,
RA Town C.D.;
RT "Araport11: a complete reannotation of the Arabidopsis thaliana reference
RT genome.";
RL Plant J. 89:789-804(2017).
RN [3]
RP GENE FAMILY.
RX PubMed=18986826; DOI=10.1016/j.tplants.2008.09.006;
RA Swaminathan K., Peterson K., Jack T.;
RT "The plant B3 superfamily.";
RL Trends Plant Sci. 13:647-655(2008).
CC -!- SUBCELLULAR LOCATION: Nucleus {ECO:0000250}.
CC -!- SEQUENCE CAUTION:
CC Sequence=AAD41990.1; Type=Erroneous gene model prediction; Evidence={ECO:0000305};
CC Sequence=AAM15189.1; Type=Erroneous gene model prediction; Evidence={ECO:0000305};
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DR EMBL; AC006232; AAM15189.1; ALT_SEQ; Genomic_DNA.
DR EMBL; AC006233; AAD41990.1; ALT_SEQ; Genomic_DNA.
DR EMBL; CP002685; AEC07994.1; -; Genomic_DNA.
DR PIR; E84672; E84672.
DR RefSeq; NP_180310.2; NM_128301.2.
DR AlphaFoldDB; Q9XIP5; -.
DR STRING; 3702.AT2G27410.1; -.
DR PaxDb; Q9XIP5; -.
DR PRIDE; Q9XIP5; -.
DR EnsemblPlants; AT2G27410.1; AT2G27410.1; AT2G27410.
DR GeneID; 817286; -.
DR Gramene; AT2G27410.1; AT2G27410.1; AT2G27410.
DR KEGG; ath:AT2G27410; -.
DR Araport; AT2G27410; -.
DR TAIR; locus:2038673; AT2G27410.
DR eggNOG; ENOG502S4WY; Eukaryota.
DR HOGENOM; CLU_067429_0_0_1; -.
DR OMA; ALCAGWN; -.
DR OrthoDB; 1371335at2759; -.
DR PRO; PR:Q9XIP5; -.
DR Proteomes; UP000006548; Chromosome 2.
DR ExpressionAtlas; Q9XIP5; baseline and differential.
DR Genevisible; Q9XIP5; AT.
DR GO; GO:0005634; C:nucleus; IEA:UniProtKB-SubCell.
DR GO; GO:0003677; F:DNA binding; IEA:UniProtKB-KW.
DR Gene3D; 2.40.330.10; -; 1.
DR InterPro; IPR005508; At2g31720-like.
DR InterPro; IPR015300; DNA-bd_pseudobarrel_sf.
DR PANTHER; PTHR31541; PTHR31541; 1.
DR Pfam; PF03754; DUF313; 1.
DR SUPFAM; SSF101936; SSF101936; 1.
PE 3: Inferred from homology;
KW DNA-binding; Nucleus; Reference proteome; Transcription;
KW Transcription regulation.
FT CHAIN 1..257
FT /note="Putative B3 domain-containing protein At2g27410"
FT /id="PRO_0000412848"
FT DNA_BIND 115..209
FT /note="TF-B3"
FT REGION 5..50
FT /note="Disordered"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT REGION 212..257
FT /note="Disordered"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT COMPBIAS 10..33
FT /note="Polar residues"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT COMPBIAS 212..230
FT /note="Polar residues"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT COMPBIAS 237..257
FT /note="Polar residues"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
SQ SEQUENCE 257 AA; 29017 MW; 790718CF9C953CC5 CRC64;
MYACARTTKI NHFRGTSTTQ NPNRGLEPSP SSYVTRRSKE KRPINVEKRS HKKRKIICPL
EEEPIQTTPP EWLLNVMRRE ENGYNPKLIS TRQLYKTDLK KTEARLSVPF KQVKTPDFLT
EDETRIIHEN AMKIRDNGVP VNFVDPELNK HVLELRKWKM KGNWIYVFVK GWKNVLDACK
TLFKEDDVYP LWSFRSGTGK LCFALTPKNS GRGNSLPGGD GASTSGESGQ VPLPIPPARY
SSNSGQGCSG ESSSSSS