Y2778_ARATH
ID Y2778_ARATH Reviewed; 235 AA.
AC O82246;
DT 20-JUN-2001, integrated into UniProtKB/Swiss-Prot.
DT 01-NOV-1998, sequence version 1.
DT 03-AUG-2022, entry version 106.
DE RecName: Full=REF/SRPP-like protein At2g47780;
GN OrderedLocusNames=At2g47780; ORFNames=F17A22.17;
OS Arabidopsis thaliana (Mouse-ear cress).
OC Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
OC Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae;
OC rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis.
OX NCBI_TaxID=3702;
RN [1]
RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC STRAIN=cv. Columbia;
RX PubMed=10617197; DOI=10.1038/45471;
RA Lin X., Kaul S., Rounsley S.D., Shea T.P., Benito M.-I., Town C.D.,
RA Fujii C.Y., Mason T.M., Bowman C.L., Barnstead M.E., Feldblyum T.V.,
RA Buell C.R., Ketchum K.A., Lee J.J., Ronning C.M., Koo H.L., Moffat K.S.,
RA Cronin L.A., Shen M., Pai G., Van Aken S., Umayam L., Tallon L.J.,
RA Gill J.E., Adams M.D., Carrera A.J., Creasy T.H., Goodman H.M.,
RA Somerville C.R., Copenhaver G.P., Preuss D., Nierman W.C., White O.,
RA Eisen J.A., Salzberg S.L., Fraser C.M., Venter J.C.;
RT "Sequence and analysis of chromosome 2 of the plant Arabidopsis thaliana.";
RL Nature 402:761-768(1999).
RN [2]
RP GENOME REANNOTATION.
RC STRAIN=cv. Columbia;
RX PubMed=27862469; DOI=10.1111/tpj.13415;
RA Cheng C.Y., Krishnakumar V., Chan A.P., Thibaud-Nissen F., Schobel S.,
RA Town C.D.;
RT "Araport11: a complete reannotation of the Arabidopsis thaliana reference
RT genome.";
RL Plant J. 89:789-804(2017).
RN [3]
RP NUCLEOTIDE SEQUENCE [LARGE SCALE MRNA].
RC STRAIN=cv. Columbia;
RX PubMed=14593172; DOI=10.1126/science.1088305;
RA Yamada K., Lim J., Dale J.M., Chen H., Shinn P., Palm C.J., Southwick A.M.,
RA Wu H.C., Kim C.J., Nguyen M., Pham P.K., Cheuk R.F., Karlin-Newmann G.,
RA Liu S.X., Lam B., Sakano H., Wu T., Yu G., Miranda M., Quach H.L.,
RA Tripp M., Chang C.H., Lee J.M., Toriumi M.J., Chan M.M., Tang C.C.,
RA Onodera C.S., Deng J.M., Akiyama K., Ansari Y., Arakawa T., Banh J.,
RA Banno F., Bowser L., Brooks S.Y., Carninci P., Chao Q., Choy N., Enju A.,
RA Goldsmith A.D., Gurjal M., Hansen N.F., Hayashizaki Y., Johnson-Hopson C.,
RA Hsuan V.W., Iida K., Karnes M., Khan S., Koesema E., Ishida J., Jiang P.X.,
RA Jones T., Kawai J., Kamiya A., Meyers C., Nakajima M., Narusaka M.,
RA Seki M., Sakurai T., Satou M., Tamse R., Vaysberg M., Wallender E.K.,
RA Wong C., Yamamura Y., Yuan S., Shinozaki K., Davis R.W., Theologis A.,
RA Ecker J.R.;
RT "Empirical analysis of transcriptional activity in the Arabidopsis
RT genome.";
RL Science 302:842-846(2003).
CC -!- SIMILARITY: Belongs to the REF/SRPP family. {ECO:0000305}.
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DR EMBL; AC005309; AAC63633.1; -; Genomic_DNA.
DR EMBL; CP002685; AEC10887.1; -; Genomic_DNA.
DR EMBL; BT000468; AAN17445.1; -; mRNA.
DR EMBL; BT002146; AAN72157.1; -; mRNA.
DR PIR; D84919; D84919.
DR RefSeq; NP_182299.1; NM_130345.5.
DR AlphaFoldDB; O82246; -.
DR STRING; 3702.AT2G47780.1; -.
DR PaxDb; O82246; -.
DR PRIDE; O82246; -.
DR ProteomicsDB; 232350; -.
DR EnsemblPlants; AT2G47780.1; AT2G47780.1; AT2G47780.
DR GeneID; 819390; -.
DR Gramene; AT2G47780.1; AT2G47780.1; AT2G47780.
DR KEGG; ath:AT2G47780; -.
DR Araport; AT2G47780; -.
DR TAIR; locus:2043373; AT2G47780.
DR eggNOG; ENOG502QUI7; Eukaryota.
DR HOGENOM; CLU_069928_1_0_1; -.
DR InParanoid; O82246; -.
DR OMA; CFSTVYE; -.
DR OrthoDB; 1309723at2759; -.
DR PhylomeDB; O82246; -.
DR PRO; PR:O82246; -.
DR Proteomes; UP000006548; Chromosome 2.
DR ExpressionAtlas; O82246; baseline and differential.
DR Genevisible; O82246; AT.
DR GO; GO:0005811; C:lipid droplet; IDA:TAIR.
DR GO; GO:0080186; P:developmental vegetative growth; IMP:TAIR.
DR GO; GO:0034389; P:lipid droplet organization; IMP:TAIR.
DR GO; GO:0045927; P:positive regulation of growth; IMP:TAIR.
DR GO; GO:1902584; P:positive regulation of response to water deprivation; IMP:TAIR.
DR InterPro; IPR008802; REF.
DR PANTHER; PTHR33732; PTHR33732; 1.
DR Pfam; PF05755; REF; 1.
PE 2: Evidence at transcript level;
KW Reference proteome.
FT CHAIN 1..235
FT /note="REF/SRPP-like protein At2g47780"
FT /id="PRO_0000221065"
FT REGION 1..32
FT /note="Disordered"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT COMPBIAS 12..32
FT /note="Polar residues"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
SQ SEQUENCE 235 AA; 26642 MW; D35E34513504A9C9 CRC64;
MAEDEIVVEE EQSQPQEITP VPPSSSSSPS LVVEDDDEMK LKHLEFIQVA AVYFAACFST
LYELAKDNAG PLKLGVENIE DCVRTVLAPL YEKFHDVPFK LLLFVDRKVD DVFFDVETYV
PSLVKQASSQ ALTVATEVQR TGVVDTTKSI ARSVRDKYEP AAEYYAATLW RLLNQLPLFP
EVAHLVIPTA FYWSEKYNDA VRYVGDRDYF GAEYLPMIPI EKISDILEQD QCRAD