Y2835_ORYSJ
ID Y2835_ORYSJ Reviewed; 412 AA.
AC Q6EU30; A0A0N7KFW0;
DT 16-JUN-2009, integrated into UniProtKB/Swiss-Prot.
DT 16-AUG-2004, sequence version 1.
DT 03-AUG-2022, entry version 94.
DE RecName: Full=B3 domain-containing protein Os02g0683500;
GN OrderedLocusNames=Os02g0683500, LOC_Os02g45850; ORFNames=OJ1123_G04.23;
OS Oryza sativa subsp. japonica (Rice).
OC Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
OC Spermatophyta; Magnoliopsida; Liliopsida; Poales; Poaceae; BOP clade;
OC Oryzoideae; Oryzeae; Oryzinae; Oryza; Oryza sativa.
OX NCBI_TaxID=39947;
RN [1]
RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC STRAIN=cv. Nipponbare;
RX PubMed=16100779; DOI=10.1038/nature03895;
RG International rice genome sequencing project (IRGSP);
RT "The map-based sequence of the rice genome.";
RL Nature 436:793-800(2005).
RN [2]
RP GENOME REANNOTATION.
RC STRAIN=cv. Nipponbare;
RX PubMed=18089549; DOI=10.1093/nar/gkm978;
RG The rice annotation project (RAP);
RT "The rice annotation project database (RAP-DB): 2008 update.";
RL Nucleic Acids Res. 36:D1028-D1033(2008).
RN [3]
RP GENOME REANNOTATION.
RC STRAIN=cv. Nipponbare;
RX PubMed=24280374; DOI=10.1186/1939-8433-6-4;
RA Kawahara Y., de la Bastide M., Hamilton J.P., Kanamori H., McCombie W.R.,
RA Ouyang S., Schwartz D.C., Tanaka T., Wu J., Zhou S., Childs K.L.,
RA Davidson R.M., Lin H., Quesada-Ocampo L., Vaillancourt B., Sakai H.,
RA Lee S.S., Kim J., Numa H., Itoh T., Buell C.R., Matsumoto T.;
RT "Improvement of the Oryza sativa Nipponbare reference genome using next
RT generation sequence and optical map data.";
RL Rice 6:4-4(2013).
RN [4]
RP NUCLEOTIDE SEQUENCE [LARGE SCALE MRNA].
RC STRAIN=cv. Nipponbare;
RX PubMed=12869764; DOI=10.1126/science.1081288;
RG The rice full-length cDNA consortium;
RT "Collection, mapping, and annotation of over 28,000 cDNA clones from
RT japonica rice.";
RL Science 301:376-379(2003).
CC -!- SUBCELLULAR LOCATION: Nucleus {ECO:0000255|PROSITE-ProRule:PRU00326}.
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DR EMBL; AP004178; BAD27840.1; -; Genomic_DNA.
DR EMBL; AP008208; BAF09668.1; -; Genomic_DNA.
DR EMBL; AP014958; BAS80313.1; -; Genomic_DNA.
DR EMBL; AK109908; BAG98956.1; -; mRNA.
DR RefSeq; XP_015624169.1; XM_015768683.1.
DR AlphaFoldDB; Q6EU30; -.
DR SMR; Q6EU30; -.
DR STRING; 4530.OS02T0683500-01; -.
DR PaxDb; Q6EU30; -.
DR PRIDE; Q6EU30; -.
DR EnsemblPlants; Os02t0683500-01; Os02t0683500-01; Os02g0683500.
DR GeneID; 4330337; -.
DR Gramene; Os02t0683500-01; Os02t0683500-01; Os02g0683500.
DR KEGG; osa:4330337; -.
DR eggNOG; ENOG502QSHQ; Eukaryota.
DR HOGENOM; CLU_038898_3_0_1; -.
DR InParanoid; Q6EU30; -.
DR OMA; TSHYAPW; -.
DR OrthoDB; 661086at2759; -.
DR Proteomes; UP000000763; Chromosome 2.
DR Proteomes; UP000059680; Chromosome 2.
DR Genevisible; Q6EU30; OS.
DR GO; GO:0005634; C:nucleus; IEA:UniProtKB-SubCell.
DR GO; GO:0003677; F:DNA binding; IEA:UniProtKB-KW.
DR GO; GO:0003700; F:DNA-binding transcription factor activity; IEA:InterPro.
DR CDD; cd10017; B3_DNA; 1.
DR Gene3D; 2.40.330.10; -; 1.
DR InterPro; IPR003340; B3_DNA-bd.
DR InterPro; IPR015300; DNA-bd_pseudobarrel_sf.
DR InterPro; IPR044800; LEC2-like.
DR PANTHER; PTHR31140; PTHR31140; 1.
DR Pfam; PF02362; B3; 1.
DR SMART; SM01019; B3; 1.
DR SUPFAM; SSF101936; SSF101936; 1.
DR PROSITE; PS50863; B3; 1.
PE 2: Evidence at transcript level;
KW DNA-binding; Nucleus; Reference proteome; Transcription;
KW Transcription regulation.
FT CHAIN 1..412
FT /note="B3 domain-containing protein Os02g0683500"
FT /id="PRO_0000376949"
FT DNA_BIND 96..200
FT /note="TF-B3"
FT /evidence="ECO:0000255|PROSITE-ProRule:PRU00326"
FT REGION 1..87
FT /note="Disordered"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT REGION 374..412
FT /note="Disordered"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT COMPBIAS 35..70
FT /note="Polar residues"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT COMPBIAS 388..403
FT /note="Polar residues"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
SQ SEQUENCE 412 AA; 43948 MW; 877D908D557E0ADE CRC64;
MEFTTSSRFS KEEEDEEQDE AGRREIPFMT ATAEAAPAPT SSSSSPAHHA ASASASASAS
GSSTPFRSDD GAGASGSGGG GGGGGEAEVV EKEHMFDKVV TPSDVGKLNR LVIPKQYAEK
YFPLDAAANE KGLLLNFEDR AGKPWRFRYS YWNSSQSYVM TKGWSRFVKE KRLDAGDTVS
FSRGIGDEAA RHRLFIDWKR RADTRDPLRL PRGLPLPMPL TSHYAPWGIG GGGGFFVQPS
PPATLYEHRL RQGLDFRAFN PAAAMGRQVL LFGSARIPPQ APLLARAPSP LHHHYTLQPS
GDGVRAAGSP VVLDSVPVIE SPTTAAKRVR LFGVNLDNPH AGGGGGAAAG ESSNHGNALS
LQTPAWMRRD PTLRLLELPP HHHHGAESSA ASSPSSSSSS KRDAHSALDL DL