Y2982_ORYSJ
ID Y2982_ORYSJ Reviewed; 1048 AA.
AC Q6K5K2; A0A0N7KFL7;
DT 16-JUN-2009, integrated into UniProtKB/Swiss-Prot.
DT 05-JUL-2004, sequence version 1.
DT 25-MAY-2022, entry version 93.
DE RecName: Full=B3 domain-containing protein Os02g0598200;
GN OrderedLocusNames=Os02g0598200, LOC_Os02g38470; ORFNames=OJ1212_D02.14;
OS Oryza sativa subsp. japonica (Rice).
OC Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
OC Spermatophyta; Magnoliopsida; Liliopsida; Poales; Poaceae; BOP clade;
OC Oryzoideae; Oryzeae; Oryzinae; Oryza; Oryza sativa.
OX NCBI_TaxID=39947;
RN [1]
RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC STRAIN=cv. Nipponbare;
RX PubMed=16100779; DOI=10.1038/nature03895;
RG International rice genome sequencing project (IRGSP);
RT "The map-based sequence of the rice genome.";
RL Nature 436:793-800(2005).
RN [2]
RP GENOME REANNOTATION.
RC STRAIN=cv. Nipponbare;
RX PubMed=18089549; DOI=10.1093/nar/gkm978;
RG The rice annotation project (RAP);
RT "The rice annotation project database (RAP-DB): 2008 update.";
RL Nucleic Acids Res. 36:D1028-D1033(2008).
RN [3]
RP GENOME REANNOTATION.
RC STRAIN=cv. Nipponbare;
RX PubMed=24280374; DOI=10.1186/1939-8433-6-4;
RA Kawahara Y., de la Bastide M., Hamilton J.P., Kanamori H., McCombie W.R.,
RA Ouyang S., Schwartz D.C., Tanaka T., Wu J., Zhou S., Childs K.L.,
RA Davidson R.M., Lin H., Quesada-Ocampo L., Vaillancourt B., Sakai H.,
RA Lee S.S., Kim J., Numa H., Itoh T., Buell C.R., Matsumoto T.;
RT "Improvement of the Oryza sativa Nipponbare reference genome using next
RT generation sequence and optical map data.";
RL Rice 6:4-4(2013).
RN [4]
RP NUCLEOTIDE SEQUENCE [LARGE SCALE MRNA].
RC STRAIN=cv. Nipponbare;
RX PubMed=12869764; DOI=10.1126/science.1081288;
RG The rice full-length cDNA consortium;
RT "Collection, mapping, and annotation of over 28,000 cDNA clones from
RT japonica rice.";
RL Science 301:376-379(2003).
CC -!- SUBCELLULAR LOCATION: Nucleus {ECO:0000255|PROSITE-ProRule:PRU00326}.
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DR EMBL; AP005384; BAD22126.1; -; Genomic_DNA.
DR EMBL; AP008208; BAF09244.1; -; Genomic_DNA.
DR EMBL; AP014958; BAS79569.1; -; Genomic_DNA.
DR EMBL; AK121990; BAH00744.1; -; mRNA.
DR RefSeq; XP_015624189.1; XM_015768703.1.
DR RefSeq; XP_015624190.1; XM_015768704.1.
DR AlphaFoldDB; Q6K5K2; -.
DR STRING; 4530.OS02T0598200-02; -.
DR PaxDb; Q6K5K2; -.
DR PRIDE; Q6K5K2; -.
DR EnsemblPlants; Os02t0598200-02; Os02t0598200-02; Os02g0598200.
DR GeneID; 4329874; -.
DR Gramene; Os02t0598200-02; Os02t0598200-02; Os02g0598200.
DR KEGG; osa:4329874; -.
DR eggNOG; ENOG502RXIH; Eukaryota.
DR InParanoid; Q6K5K2; -.
DR OMA; RHDMKKN; -.
DR OrthoDB; 438754at2759; -.
DR Proteomes; UP000000763; Chromosome 2.
DR Proteomes; UP000059680; Chromosome 2.
DR ExpressionAtlas; Q6K5K2; baseline and differential.
DR Genevisible; Q6K5K2; OS.
DR GO; GO:0005634; C:nucleus; IEA:UniProtKB-SubCell.
DR GO; GO:0003677; F:DNA binding; IEA:UniProtKB-KW.
DR CDD; cd10017; B3_DNA; 2.
DR Gene3D; 2.40.330.10; -; 2.
DR InterPro; IPR003340; B3_DNA-bd.
DR InterPro; IPR015300; DNA-bd_pseudobarrel_sf.
DR InterPro; IPR044837; REM16-like.
DR PANTHER; PTHR31391; PTHR31391; 1.
DR Pfam; PF02362; B3; 2.
DR SMART; SM01019; B3; 2.
DR SUPFAM; SSF101936; SSF101936; 2.
DR PROSITE; PS50863; B3; 2.
PE 2: Evidence at transcript level;
KW DNA-binding; Nucleus; Reference proteome; Repeat; Transcription;
KW Transcription regulation.
FT CHAIN 1..1048
FT /note="B3 domain-containing protein Os02g0598200"
FT /id="PRO_0000378044"
FT DNA_BIND 375..468
FT /note="TF-B3 1"
FT /evidence="ECO:0000255|PROSITE-ProRule:PRU00326"
FT DNA_BIND 953..1048
FT /note="TF-B3 2"
FT /evidence="ECO:0000255|PROSITE-ProRule:PRU00326"
FT REGION 1..345
FT /note="Disordered"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT REGION 505..528
FT /note="Disordered"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT COMPBIAS 22..233
FT /note="Basic and acidic residues"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT COMPBIAS 278..307
FT /note="Basic and acidic residues"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT COMPBIAS 315..345
FT /note="Basic and acidic residues"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
SQ SEQUENCE 1048 AA; 118379 MW; 740C907971822150 CRC64;
MDGAVRGQGC VGRLRSFNKT KKKNRNCSDD MRNGDDEEKK YSHHDMKNNL RNDANEEKRK
SSDDMRDGDF EEKKKCSRHD MKKNLRNDAN EEKRKSSDDM RDGDDEEKKC SRQDMKKNLR
NDADEEKRKS SDDMRDGDDE EKKKRSRHDM KKNSRNDADE EKRKRKRKCS DDLKKSVVND
ASKEATSHSD WRKNRKAGSD AEQRGKKLLN GDKKAKSRKV TTPFFEKMRK IKMQRTSNQN
GEKNMKSDGD SYKKTVPLSV NKGKMEKDGT NKRTLSNTLV AKERKMRPSD SMEMKMKKKK
RDASFVQPDE RTAQTFSTKN KEKKRKAPST PLKREQKERV ASSDNKKETK KACIVAIGNE
KKNCRDGKKK KRKAAFAFFK FVRDEFEELL FIPPAVAPSL KDLIDRHVYL EDSEGKCSKI
RLSVVDGSLA FYEGWNSFVS EHCIKWGEFL LFEYTPESTF SVRVFGIDSC ERLHFSVKSG
GKGAVKKRKE RHTLSDDLIS HYNGQYQDSE DIHDGPNVSG ESPRSKEPKI TVDAEIGTRN
LVAKSINAAS ETQDSERVES GIGYGSLGAL GNKVRNLSNG ECDTRSDSVF CIQEKTRRSE
VIIISDEAYS TQVDEDTMKQ TAPSEASEIH HVTINTQKDL ERVVDGVCCE SSVALNNKMG
NLILGEPKNK NISPACSTEK TNGSEITPTT GVIPLTQENI DTVKLNTLSC FEEDRSTTRE
SELAAAIPTT SETHDSDKDL GQKHQRNSVQ VNSIIAVDKY PNDSEMNISG NIFRIYEAPA
GTRCLEKWKR GIVNGRAALD DIGQVRPEKT QKAGEKLVGN CGAMGESPVD LRIESDVTDT
CLKPILNIPI EELSILDSVS ISKCGRSRTE VNHLFNQKGA TVQLQTKKEP LKPTGSSGNR
KGDKIAVSVN RVFAHQSELQ IPQQENGNFT SCVTPVALLP AKAELLDLDD HSLQFCIPST
IQKWLELPKS LPITCRQKGR YDRNVVILKD PMRRLWPVFY HDKPVFVGFT AGWKPFAAAN
NLQAGDVCKF VKEMDEDELA FQVYITRK
