Y2992_ARATH
ID Y2992_ARATH Reviewed; 283 AA.
AC O04195;
DT 09-JAN-2007, integrated into UniProtKB/Swiss-Prot.
DT 01-JUN-2002, sequence version 2.
DT 03-AUG-2022, entry version 115.
DE RecName: Full=Uncharacterized protein At2g39920;
GN OrderedLocusNames=At2g39920; ORFNames=T28M21.8;
OS Arabidopsis thaliana (Mouse-ear cress).
OC Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
OC Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae;
OC rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis.
OX NCBI_TaxID=3702;
RN [1]
RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC STRAIN=cv. Columbia;
RX PubMed=10617197; DOI=10.1038/45471;
RA Lin X., Kaul S., Rounsley S.D., Shea T.P., Benito M.-I., Town C.D.,
RA Fujii C.Y., Mason T.M., Bowman C.L., Barnstead M.E., Feldblyum T.V.,
RA Buell C.R., Ketchum K.A., Lee J.J., Ronning C.M., Koo H.L., Moffat K.S.,
RA Cronin L.A., Shen M., Pai G., Van Aken S., Umayam L., Tallon L.J.,
RA Gill J.E., Adams M.D., Carrera A.J., Creasy T.H., Goodman H.M.,
RA Somerville C.R., Copenhaver G.P., Preuss D., Nierman W.C., White O.,
RA Eisen J.A., Salzberg S.L., Fraser C.M., Venter J.C.;
RT "Sequence and analysis of chromosome 2 of the plant Arabidopsis thaliana.";
RL Nature 402:761-768(1999).
RN [2]
RP GENOME REANNOTATION.
RC STRAIN=cv. Columbia;
RX PubMed=27862469; DOI=10.1111/tpj.13415;
RA Cheng C.Y., Krishnakumar V., Chan A.P., Thibaud-Nissen F., Schobel S.,
RA Town C.D.;
RT "Araport11: a complete reannotation of the Arabidopsis thaliana reference
RT genome.";
RL Plant J. 89:789-804(2017).
RN [3]
RP NUCLEOTIDE SEQUENCE [LARGE SCALE MRNA].
RA Brover V.V., Troukhan M.E., Alexandrov N.A., Lu Y.-P., Flavell R.B.,
RA Feldmann K.A.;
RT "Full-length cDNA from Arabidopsis thaliana.";
RL Submitted (MAR-2002) to the EMBL/GenBank/DDBJ databases.
RN [4]
RP NUCLEOTIDE SEQUENCE [LARGE SCALE MRNA].
RC STRAIN=cv. Columbia;
RA Shinn P., Chen H., Kim C.J., Ecker J.R.;
RT "Arabidopsis ORF clones.";
RL Submitted (APR-2006) to the EMBL/GenBank/DDBJ databases.
CC -!- SUBCELLULAR LOCATION: Membrane {ECO:0000305}; Single-pass membrane
CC protein {ECO:0000305}.
CC -!- ALTERNATIVE PRODUCTS:
CC Event=Alternative splicing; Named isoforms=1;
CC Comment=A number of isoforms are produced. According to EST
CC sequences.;
CC Name=1;
CC IsoId=O04195-1; Sequence=Displayed;
CC -!- SIMILARITY: Belongs to the APS1/VSP family. {ECO:0000305}.
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DR EMBL; AF002109; AAB95277.2; -; Genomic_DNA.
DR EMBL; CP002685; AEC09749.1; -; Genomic_DNA.
DR EMBL; CP002685; AEC09751.1; -; Genomic_DNA.
DR EMBL; CP002685; ANM61390.1; -; Genomic_DNA.
DR EMBL; AY087290; AAM64843.1; -; mRNA.
DR EMBL; BT025037; ABE02412.1; -; mRNA.
DR PIR; A84823; A84823.
DR RefSeq; NP_001189717.1; NM_001202788.1. [O04195-1]
DR RefSeq; NP_001323609.1; NM_001336806.1. [O04195-1]
DR RefSeq; NP_565918.1; NM_129550.4. [O04195-1]
DR AlphaFoldDB; O04195; -.
DR SMR; O04195; -.
DR STRING; 3702.AT2G39920.1; -.
DR iPTMnet; O04195; -.
DR PaxDb; O04195; -.
DR PRIDE; O04195; -.
DR ProteomicsDB; 234651; -. [O04195-1]
DR EnsemblPlants; AT2G39920.1; AT2G39920.1; AT2G39920. [O04195-1]
DR EnsemblPlants; AT2G39920.3; AT2G39920.3; AT2G39920. [O04195-1]
DR EnsemblPlants; AT2G39920.4; AT2G39920.4; AT2G39920. [O04195-1]
DR GeneID; 818579; -.
DR Gramene; AT2G39920.1; AT2G39920.1; AT2G39920. [O04195-1]
DR Gramene; AT2G39920.3; AT2G39920.3; AT2G39920. [O04195-1]
DR Gramene; AT2G39920.4; AT2G39920.4; AT2G39920. [O04195-1]
DR KEGG; ath:AT2G39920; -.
DR Araport; AT2G39920; -.
DR TAIR; locus:2061201; AT2G39920.
DR eggNOG; ENOG502QQUA; Eukaryota.
DR HOGENOM; CLU_053338_2_0_1; -.
DR InParanoid; O04195; -.
DR OrthoDB; 972392at2759; -.
DR PhylomeDB; O04195; -.
DR PRO; PR:O04195; -.
DR Proteomes; UP000006548; Chromosome 2.
DR ExpressionAtlas; O04195; baseline and differential.
DR Genevisible; O04195; AT.
DR GO; GO:0016021; C:integral component of membrane; IEA:UniProtKB-KW.
DR Gene3D; 3.40.50.1000; -; 1.
DR InterPro; IPR005519; Acid_phosphat_B-like.
DR InterPro; IPR023214; HAD_sf.
DR Pfam; PF03767; Acid_phosphat_B; 1.
PE 2: Evidence at transcript level;
KW Alternative splicing; Membrane; Reference proteome; Transmembrane;
KW Transmembrane helix.
FT CHAIN 1..283
FT /note="Uncharacterized protein At2g39920"
FT /id="PRO_0000271286"
FT TRANSMEM 41..61
FT /note="Helical"
FT /evidence="ECO:0000255"
FT REGION 1..21
FT /note="Disordered"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
SQ SEQUENCE 283 AA; 32671 MW; 5343C586399A3E32 CRC64;
MSAYTHPMER ELSGLSSRGN SELGSRYSIE SGCYMTSLAA SIFIASLVTF GVLMITLLIA
LSTMLQSCEN RNIAIVEAQR LDESFGYCKI LSLHSQLNSL DEESELPLLC RDVALHRIKQ
GIYLRELNFT IQMALTYFQT IKPMNDNCDV VVIDIDDTNL LEQDSYYMKY IEEAKHQKSI
LILALYSKLR SQGYSMVLLS RRPETERNAT IEQLKSRGYS DWSHLIMSRE DTRQKEELER
GHRVIGVIGN HMDVLRGQWN WQSKRLFKLP SLTYDDVLDY NER