Y3172_ARATH
ID Y3172_ARATH Reviewed; 407 AA.
AC Q9SCT6; Q8L8L2;
DT 14-DEC-2011, integrated into UniProtKB/Swiss-Prot.
DT 01-MAY-2000, sequence version 1.
DT 25-MAY-2022, entry version 99.
DE RecName: Full=WEB family protein At3g51720;
GN OrderedLocusNames=At3g51720; ORFNames=T18N14.100;
OS Arabidopsis thaliana (Mouse-ear cress).
OC Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
OC Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae;
OC rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis.
OX NCBI_TaxID=3702;
RN [1]
RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC STRAIN=cv. Columbia;
RX PubMed=11130713; DOI=10.1038/35048706;
RA Salanoubat M., Lemcke K., Rieger M., Ansorge W., Unseld M., Fartmann B.,
RA Valle G., Bloecker H., Perez-Alonso M., Obermaier B., Delseny M.,
RA Boutry M., Grivell L.A., Mache R., Puigdomenech P., De Simone V.,
RA Choisne N., Artiguenave F., Robert C., Brottier P., Wincker P.,
RA Cattolico L., Weissenbach J., Saurin W., Quetier F., Schaefer M.,
RA Mueller-Auer S., Gabel C., Fuchs M., Benes V., Wurmbach E., Drzonek H.,
RA Erfle H., Jordan N., Bangert S., Wiedelmann R., Kranz H., Voss H.,
RA Holland R., Brandt P., Nyakatura G., Vezzi A., D'Angelo M., Pallavicini A.,
RA Toppo S., Simionati B., Conrad A., Hornischer K., Kauer G., Loehnert T.-H.,
RA Nordsiek G., Reichelt J., Scharfe M., Schoen O., Bargues M., Terol J.,
RA Climent J., Navarro P., Collado C., Perez-Perez A., Ottenwaelder B.,
RA Duchemin D., Cooke R., Laudie M., Berger-Llauro C., Purnelle B., Masuy D.,
RA de Haan M., Maarse A.C., Alcaraz J.-P., Cottet A., Casacuberta E.,
RA Monfort A., Argiriou A., Flores M., Liguori R., Vitale D., Mannhaupt G.,
RA Haase D., Schoof H., Rudd S., Zaccaria P., Mewes H.-W., Mayer K.F.X.,
RA Kaul S., Town C.D., Koo H.L., Tallon L.J., Jenkins J., Rooney T., Rizzo M.,
RA Walts A., Utterback T., Fujii C.Y., Shea T.P., Creasy T.H., Haas B.,
RA Maiti R., Wu D., Peterson J., Van Aken S., Pai G., Militscher J.,
RA Sellers P., Gill J.E., Feldblyum T.V., Preuss D., Lin X., Nierman W.C.,
RA Salzberg S.L., White O., Venter J.C., Fraser C.M., Kaneko T., Nakamura Y.,
RA Sato S., Kato T., Asamizu E., Sasamoto S., Kimura T., Idesawa K.,
RA Kawashima K., Kishida Y., Kiyokawa C., Kohara M., Matsumoto M., Matsuno A.,
RA Muraki A., Nakayama S., Nakazaki N., Shinpo S., Takeuchi C., Wada T.,
RA Watanabe A., Yamada M., Yasuda M., Tabata S.;
RT "Sequence and analysis of chromosome 3 of the plant Arabidopsis thaliana.";
RL Nature 408:820-822(2000).
RN [2]
RP GENOME REANNOTATION.
RC STRAIN=cv. Columbia;
RX PubMed=27862469; DOI=10.1111/tpj.13415;
RA Cheng C.Y., Krishnakumar V., Chan A.P., Thibaud-Nissen F., Schobel S.,
RA Town C.D.;
RT "Araport11: a complete reannotation of the Arabidopsis thaliana reference
RT genome.";
RL Plant J. 89:789-804(2017).
RN [3]
RP NUCLEOTIDE SEQUENCE [LARGE SCALE MRNA].
RC STRAIN=cv. Columbia;
RX PubMed=14593172; DOI=10.1126/science.1088305;
RA Yamada K., Lim J., Dale J.M., Chen H., Shinn P., Palm C.J., Southwick A.M.,
RA Wu H.C., Kim C.J., Nguyen M., Pham P.K., Cheuk R.F., Karlin-Newmann G.,
RA Liu S.X., Lam B., Sakano H., Wu T., Yu G., Miranda M., Quach H.L.,
RA Tripp M., Chang C.H., Lee J.M., Toriumi M.J., Chan M.M., Tang C.C.,
RA Onodera C.S., Deng J.M., Akiyama K., Ansari Y., Arakawa T., Banh J.,
RA Banno F., Bowser L., Brooks S.Y., Carninci P., Chao Q., Choy N., Enju A.,
RA Goldsmith A.D., Gurjal M., Hansen N.F., Hayashizaki Y., Johnson-Hopson C.,
RA Hsuan V.W., Iida K., Karnes M., Khan S., Koesema E., Ishida J., Jiang P.X.,
RA Jones T., Kawai J., Kamiya A., Meyers C., Nakajima M., Narusaka M.,
RA Seki M., Sakurai T., Satou M., Tamse R., Vaysberg M., Wallender E.K.,
RA Wong C., Yamamura Y., Yuan S., Shinozaki K., Davis R.W., Theologis A.,
RA Ecker J.R.;
RT "Empirical analysis of transcriptional activity in the Arabidopsis
RT genome.";
RL Science 302:842-846(2003).
RN [4]
RP NUCLEOTIDE SEQUENCE [LARGE SCALE MRNA].
RA Brover V.V., Troukhan M.E., Alexandrov N.A., Lu Y.-P., Flavell R.B.,
RA Feldmann K.A.;
RT "Full-length cDNA from Arabidopsis thaliana.";
RL Submitted (MAR-2002) to the EMBL/GenBank/DDBJ databases.
CC -!- SIMILARITY: Belongs to the WEB family. {ECO:0000305}.
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DR EMBL; AL132968; CAB63158.1; -; Genomic_DNA.
DR EMBL; CP002686; AEE78830.1; -; Genomic_DNA.
DR EMBL; AY069905; AAL47456.1; -; mRNA.
DR EMBL; AY113026; AAM47334.1; -; mRNA.
DR EMBL; AY088925; AAM67231.1; -; mRNA.
DR PIR; T46068; T46068.
DR RefSeq; NP_190740.1; NM_115031.2.
DR AlphaFoldDB; Q9SCT6; -.
DR SMR; Q9SCT6; -.
DR STRING; 3702.AT3G51720.1; -.
DR PaxDb; Q9SCT6; -.
DR PRIDE; Q9SCT6; -.
DR EnsemblPlants; AT3G51720.1; AT3G51720.1; AT3G51720.
DR GeneID; 824335; -.
DR Gramene; AT3G51720.1; AT3G51720.1; AT3G51720.
DR KEGG; ath:AT3G51720; -.
DR Araport; AT3G51720; -.
DR TAIR; locus:2098247; AT3G51720.
DR eggNOG; ENOG502QSAB; Eukaryota.
DR HOGENOM; CLU_017338_2_0_1; -.
DR InParanoid; Q9SCT6; -.
DR OMA; TEDEQCV; -.
DR OrthoDB; 1046380at2759; -.
DR PhylomeDB; Q9SCT6; -.
DR PRO; PR:Q9SCT6; -.
DR Proteomes; UP000006548; Chromosome 3.
DR ExpressionAtlas; Q9SCT6; baseline and differential.
DR Genevisible; Q9SCT6; AT.
DR GO; GO:0005829; C:cytosol; IBA:GO_Central.
DR GO; GO:0009904; P:chloroplast accumulation movement; IBA:GO_Central.
DR GO; GO:0009903; P:chloroplast avoidance movement; IBA:GO_Central.
DR InterPro; IPR008545; Web.
DR Pfam; PF05701; WEMBL; 1.
PE 2: Evidence at transcript level;
KW Coiled coil; Reference proteome.
FT CHAIN 1..407
FT /note="WEB family protein At3g51720"
FT /id="PRO_0000414073"
FT COILED 72..99
FT /evidence="ECO:0000255"
FT COILED 128..217
FT /evidence="ECO:0000255"
FT COILED 247..278
FT /evidence="ECO:0000255"
FT CONFLICT 28
FT /note="R -> H (in Ref. 4; AAM67231)"
FT /evidence="ECO:0000305"
FT CONFLICT 289
FT /note="R -> I (in Ref. 4; AAM67231)"
FT /evidence="ECO:0000305"
SQ SEQUENCE 407 AA; 45954 MW; E96FC602496DB33D CRC64;
MAETLEPSLV GEIDTSAPFE SVREAATRFG GFGFWKPSSL NISEASQNEV GMVLKASELE
KELIEKEGET LKVLKSLEST KAIVEELKSK IQNKEDKENC DMNVFKELNQ AKMNLCKTTK
DLAAIRVSVG LLNKRLEEER AALEKTRERL NSENAAEMSM EIQRLSYEAK EFSRTGENVR
YAVNKAVAEI EQTRNKIEAA EMRLIAARKM KEAARAAEAV AIAEIKAVTR RGRRRRRGGN
GEETMQEEIL ETIDETAREI RSSRRTLEEG LAKMEAEEGN WWWTEQRRRS SCSAKFKNPP
YMMDVKGLNM MMNGDGTSSS VAVLKPTMSI GQILSRKLLL ADESAMMMNG RVSLGQILGK
TNFGDREKEK RFNGKRKRFG FANLSVMLNK ESKKKNKKKK IALNLSC