Y3175_ALTMD
ID Y3175_ALTMD Reviewed; 240 AA.
AC B4RWE1; F2GAW2;
DT 14-APR-2009, integrated into UniProtKB/Swiss-Prot.
DT 23-SEP-2008, sequence version 1.
DT 25-MAY-2022, entry version 71.
DE RecName: Full=Probable transcriptional regulatory protein MADE_1004275 {ECO:0000255|HAMAP-Rule:MF_00693};
GN OrderedLocusNames=MADE_1004275;
OS Alteromonas mediterranea (strain DSM 17117 / CIP 110805 / LMG 28347 / Deep
OS ecotype).
OC Bacteria; Proteobacteria; Gammaproteobacteria; Alteromonadales;
OC Alteromonadaceae; Alteromonas/Salinimonas group; Alteromonas.
OX NCBI_TaxID=1774373;
RN [1]
RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC STRAIN=DSM 17117 / CIP 110805 / LMG 28347 / Deep ecotype;
RX PubMed=18670397; DOI=10.1038/ismej.2008.74;
RA Ivars-Martinez E., Martin-Cuadrado A.-B., D'Auria G., Mira A., Ferriera S.,
RA Johnson J., Friedman R., Rodriguez-Valera F.;
RT "Comparative genomics of two ecotypes of the marine planktonic copiotroph
RT Alteromonas macleodii suggests alternative lifestyles associated with
RT different kinds of particulate organic matter.";
RL ISME J. 2:1194-1212(2008).
CC -!- SUBCELLULAR LOCATION: Cytoplasm {ECO:0000255|HAMAP-Rule:MF_00693}.
CC -!- SIMILARITY: Belongs to the TACO1 family. {ECO:0000255|HAMAP-
CC Rule:MF_00693}.
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DR EMBL; CP001103; AEA97003.1; -; Genomic_DNA.
DR RefSeq; WP_012517357.1; NC_011138.3.
DR AlphaFoldDB; B4RWE1; -.
DR SMR; B4RWE1; -.
DR EnsemblBacteria; AEA97003; AEA97003; MADE_1004275.
DR GeneID; 56341323; -.
DR KEGG; amc:MADE_1004275; -.
DR HOGENOM; CLU_062974_2_0_6; -.
DR OMA; ETIMYEG; -.
DR Proteomes; UP000001870; Chromosome.
DR GO; GO:0005737; C:cytoplasm; IEA:UniProtKB-SubCell.
DR GO; GO:0003677; F:DNA binding; IEA:UniProtKB-UniRule.
DR GO; GO:0006355; P:regulation of transcription, DNA-templated; IEA:UniProtKB-UniRule.
DR Gene3D; 1.10.10.200; -; 1.
DR Gene3D; 3.30.70.980; -; 2.
DR HAMAP; MF_00693; Transcrip_reg_TACO1; 1.
DR InterPro; IPR017856; Integrase-like_N.
DR InterPro; IPR002876; Transcrip_reg_TACO1-like.
DR InterPro; IPR026564; Transcrip_reg_TACO1-like_dom3.
DR InterPro; IPR029072; YebC-like.
DR PANTHER; PTHR12532; PTHR12532; 1.
DR Pfam; PF01709; Transcrip_reg; 1.
DR SUPFAM; SSF75625; SSF75625; 1.
PE 3: Inferred from homology;
KW Cytoplasm; DNA-binding; Transcription; Transcription regulation.
FT CHAIN 1..240
FT /note="Probable transcriptional regulatory protein
FT MADE_1004275"
FT /id="PRO_1000132147"
SQ SEQUENCE 240 AA; 26654 MW; E53A39EC38E5F516 CRC64;
MGRAFEVRKA AMAKTAGAKT KVYSKYGKEI YVCAKNGGAD PDTNLSLRRL MEKAKKDQVP
SHVIEKAIDK AAGGAGEDFQ PMRYEGFGPG NCMVIVDCLS DNANRTITEV RNCFTKTNAK
LGAQGAVSHM FDHQAVFQFE GDDEDAILEV LMEADVDVTD VEVEDGKVTV YAPHTEFYQV
RTALTEAYPD LSFIADEISW MPQTETEISE EDMPMFEKFM DMLNDCDDVQ DVYHNAVTPS