Y3195_ARATH
ID Y3195_ARATH Reviewed; 312 AA.
AC Q9LH42; Q8LAI5;
DT 10-FEB-2009, integrated into UniProtKB/Swiss-Prot.
DT 01-OCT-2000, sequence version 1.
DT 03-AUG-2022, entry version 94.
DE RecName: Full=UPF0725 protein At3g19520;
GN OrderedLocusNames=At3g19520; ORFNames=T31J18.2;
OS Arabidopsis thaliana (Mouse-ear cress).
OC Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
OC Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae;
OC rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis.
OX NCBI_TaxID=3702;
RN [1]
RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC STRAIN=cv. Columbia;
RX PubMed=10907853; DOI=10.1093/dnares/7.3.217;
RA Kaneko T., Katoh T., Sato S., Nakamura Y., Asamizu E., Tabata S.;
RT "Structural analysis of Arabidopsis thaliana chromosome 3. II. Sequence
RT features of the 4,251,695 bp regions covered by 90 P1, TAC and BAC
RT clones.";
RL DNA Res. 7:217-221(2000).
RN [2]
RP GENOME REANNOTATION.
RC STRAIN=cv. Columbia;
RX PubMed=27862469; DOI=10.1111/tpj.13415;
RA Cheng C.Y., Krishnakumar V., Chan A.P., Thibaud-Nissen F., Schobel S.,
RA Town C.D.;
RT "Araport11: a complete reannotation of the Arabidopsis thaliana reference
RT genome.";
RL Plant J. 89:789-804(2017).
RN [3]
RP NUCLEOTIDE SEQUENCE [LARGE SCALE MRNA].
RC STRAIN=cv. Columbia;
RX PubMed=14593172; DOI=10.1126/science.1088305;
RA Yamada K., Lim J., Dale J.M., Chen H., Shinn P., Palm C.J., Southwick A.M.,
RA Wu H.C., Kim C.J., Nguyen M., Pham P.K., Cheuk R.F., Karlin-Newmann G.,
RA Liu S.X., Lam B., Sakano H., Wu T., Yu G., Miranda M., Quach H.L.,
RA Tripp M., Chang C.H., Lee J.M., Toriumi M.J., Chan M.M., Tang C.C.,
RA Onodera C.S., Deng J.M., Akiyama K., Ansari Y., Arakawa T., Banh J.,
RA Banno F., Bowser L., Brooks S.Y., Carninci P., Chao Q., Choy N., Enju A.,
RA Goldsmith A.D., Gurjal M., Hansen N.F., Hayashizaki Y., Johnson-Hopson C.,
RA Hsuan V.W., Iida K., Karnes M., Khan S., Koesema E., Ishida J., Jiang P.X.,
RA Jones T., Kawai J., Kamiya A., Meyers C., Nakajima M., Narusaka M.,
RA Seki M., Sakurai T., Satou M., Tamse R., Vaysberg M., Wallender E.K.,
RA Wong C., Yamamura Y., Yuan S., Shinozaki K., Davis R.W., Theologis A.,
RA Ecker J.R.;
RT "Empirical analysis of transcriptional activity in the Arabidopsis
RT genome.";
RL Science 302:842-846(2003).
RN [4]
RP NUCLEOTIDE SEQUENCE [LARGE SCALE MRNA].
RA Brover V.V., Troukhan M.E., Alexandrov N.A., Lu Y.-P., Flavell R.B.,
RA Feldmann K.A.;
RT "Full-length cDNA from Arabidopsis thaliana.";
RL Submitted (MAR-2002) to the EMBL/GenBank/DDBJ databases.
CC -!- SIMILARITY: Belongs to the UPF0725 (EMB2204) family. {ECO:0000305}.
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DR EMBL; AP002065; BAB01974.1; -; Genomic_DNA.
DR EMBL; CP002686; AEE76252.1; -; Genomic_DNA.
DR EMBL; CP002686; AEE76253.1; -; Genomic_DNA.
DR EMBL; BT003826; AAO41878.1; -; mRNA.
DR EMBL; BT005127; AAO50660.1; -; mRNA.
DR EMBL; AY087790; AAM65326.1; -; mRNA.
DR RefSeq; NP_001118662.1; NM_001125190.1.
DR RefSeq; NP_566641.1; NM_112841.5.
DR AlphaFoldDB; Q9LH42; -.
DR SMR; Q9LH42; -.
DR BioGRID; 6821; 5.
DR IntAct; Q9LH42; 2.
DR STRING; 3702.AT3G19520.1; -.
DR iPTMnet; Q9LH42; -.
DR PaxDb; Q9LH42; -.
DR PRIDE; Q9LH42; -.
DR ProteomicsDB; 234603; -.
DR EnsemblPlants; AT3G19520.1; AT3G19520.1; AT3G19520.
DR EnsemblPlants; AT3G19520.2; AT3G19520.2; AT3G19520.
DR GeneID; 821488; -.
DR Gramene; AT3G19520.1; AT3G19520.1; AT3G19520.
DR Gramene; AT3G19520.2; AT3G19520.2; AT3G19520.
DR KEGG; ath:AT3G19520; -.
DR Araport; AT3G19520; -.
DR TAIR; locus:2101530; AT3G19520.
DR HOGENOM; CLU_053767_0_1_1; -.
DR PhylomeDB; Q9LH42; -.
DR PRO; PR:Q9LH42; -.
DR Proteomes; UP000006548; Chromosome 3.
DR ExpressionAtlas; Q9LH42; baseline and differential.
DR Genevisible; Q9LH42; AT.
DR InterPro; IPR006462; MS5.
DR PANTHER; PTHR31260; PTHR31260; 1.
DR Pfam; PF04776; protein_MS5; 1.
DR TIGRFAMs; TIGR01572; A_thl_para_3677; 1.
PE 2: Evidence at transcript level;
KW Reference proteome.
FT CHAIN 1..312
FT /note="UPF0725 protein At3g19520"
FT /id="PRO_0000363131"
FT CONFLICT 137
FT /note="N -> S (in Ref. 4; AAM65326)"
FT /evidence="ECO:0000305"
FT CONFLICT 263
FT /note="G -> S (in Ref. 4; AAM65326)"
FT /evidence="ECO:0000305"
SQ SEQUENCE 312 AA; 35948 MW; 45AD5DF5E2FE451B CRC64;
MTSLSVNDRK DFVDGQMKYW RQIAESDGFD IDDVPVPRGT RAGLWSVDCK HPRFRLRACL
PKIYAMVGLH RYNLLRGTNF EHLELLKYNE SMNCVCSYYI TSVAVDLSSQ LQKTFQIRVD
EKSFGDLDLT VSVARPNDEE KVTTEKRFIH HFHCEAAADD FYKGALPDWP SVGDLNNQKR
FYMVKKCELQ SNDWIRLYLE LAVGVRYQQT SESDLSKLQV LKVAIETKEE DVQPPNRRLK
SKSLHVYITF KGLAKAPIGD EIGEHVERKA IVRRVIDERS GHLTLLGGFS NAKNDLNQSS
DDEQPFGKRR RI