Y3258_ARATH
ID Y3258_ARATH Reviewed; 171 AA.
AC Q6E244; Q9LSG8;
DT 10-FEB-2009, integrated into UniProtKB/Swiss-Prot.
DT 16-AUG-2004, sequence version 1.
DT 25-MAY-2022, entry version 72.
DE RecName: Full=UPF0725 protein At3g25080;
GN OrderedLocusNames=At3g25080; ORFNames=MJL12.2;
OS Arabidopsis thaliana (Mouse-ear cress).
OC Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
OC Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae;
OC rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis.
OX NCBI_TaxID=3702;
RN [1]
RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC STRAIN=cv. Columbia;
RX PubMed=10819329; DOI=10.1093/dnares/7.2.131;
RA Sato S., Nakamura Y., Kaneko T., Katoh T., Asamizu E., Tabata S.;
RT "Structural analysis of Arabidopsis thaliana chromosome 3. I. Sequence
RT features of the regions of 4,504,864 bp covered by sixty P1 and TAC
RT clones.";
RL DNA Res. 7:131-135(2000).
RN [2]
RP GENOME REANNOTATION.
RC STRAIN=cv. Columbia;
RX PubMed=27862469; DOI=10.1111/tpj.13415;
RA Cheng C.Y., Krishnakumar V., Chan A.P., Thibaud-Nissen F., Schobel S.,
RA Town C.D.;
RT "Araport11: a complete reannotation of the Arabidopsis thaliana reference
RT genome.";
RL Plant J. 89:789-804(2017).
RN [3]
RP NUCLEOTIDE SEQUENCE [LARGE SCALE MRNA].
RC STRAIN=cv. Columbia;
RX PubMed=16244158; DOI=10.1104/pp.105.063479;
RA Xiao Y.-L., Smith S.R., Ishmael N., Redman J.C., Kumar N., Monaghan E.L.,
RA Ayele M., Haas B.J., Wu H.C., Town C.D.;
RT "Analysis of the cDNAs of hypothetical genes on Arabidopsis chromosome 2
RT reveals numerous transcript variants.";
RL Plant Physiol. 139:1323-1337(2005).
RN [4]
RP NUCLEOTIDE SEQUENCE [LARGE SCALE MRNA].
RC STRAIN=cv. Columbia;
RA Underwood B.A., Xiao Y.-L., Moskal W.A. Jr., Monaghan E.L., Wang W.,
RA Redman J.C., Wu H.C., Utterback T., Town C.D.;
RL Submitted (OCT-2004) to the EMBL/GenBank/DDBJ databases.
CC -!- SIMILARITY: Belongs to the UPF0725 (EMB2204) family. {ECO:0000305}.
CC -!- SEQUENCE CAUTION:
CC Sequence=BAB02066.1; Type=Erroneous gene model prediction; Evidence={ECO:0000305};
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DR EMBL; AB026647; BAB02066.1; ALT_SEQ; Genomic_DNA.
DR EMBL; CP002686; AEE76975.1; -; Genomic_DNA.
DR EMBL; AY600579; AAT68378.1; -; mRNA.
DR EMBL; AY773880; AAV63909.1; -; mRNA.
DR RefSeq; NP_189144.2; NM_113412.2.
DR AlphaFoldDB; Q6E244; -.
DR SMR; Q6E244; -.
DR PaxDb; Q6E244; -.
DR PRIDE; Q6E244; -.
DR EnsemblPlants; AT3G25080.1; AT3G25080.1; AT3G25080.
DR GeneID; 822099; -.
DR Gramene; AT3G25080.1; AT3G25080.1; AT3G25080.
DR KEGG; ath:AT3G25080; -.
DR Araport; AT3G25080; -.
DR TAIR; locus:2090280; AT3G25080.
DR HOGENOM; CLU_053767_0_2_1; -.
DR InParanoid; Q6E244; -.
DR OMA; TCNIARI; -.
DR OrthoDB; 1316635at2759; -.
DR PhylomeDB; Q6E244; -.
DR PRO; PR:Q6E244; -.
DR Proteomes; UP000006548; Chromosome 3.
DR ExpressionAtlas; Q6E244; baseline and differential.
DR Genevisible; Q6E244; AT.
DR InterPro; IPR006462; MS5.
DR PANTHER; PTHR31260; PTHR31260; 1.
DR Pfam; PF04776; protein_MS5; 1.
DR TIGRFAMs; TIGR01572; A_thl_para_3677; 1.
PE 2: Evidence at transcript level;
KW Reference proteome.
FT CHAIN 1..171
FT /note="UPF0725 protein At3g25080"
FT /id="PRO_0000363117"
SQ SEQUENCE 171 AA; 19361 MW; 95FE40814730F3D8 CRC64;
MEPAADSSSS LQTFQTEVTE DSFGKFILTC NIARIRGEPS NVYTGLNIGC RLPECPPENP
FEIYYLMKDS ELQENNDWIR LYLELAVATT DRNREASDFG LSNLEIVNVA VDAEGLLNAK
NAIFYIRYKD LYEARLGNAV FDRIAIVRRI FDEDTGRFTL VGQNQSSDII N