Y3270_ARATH
ID Y3270_ARATH Reviewed; 446 AA.
AC Q9LYL6;
DT 14-DEC-2011, integrated into UniProtKB/Swiss-Prot.
DT 01-OCT-2000, sequence version 1.
DT 25-MAY-2022, entry version 99.
DE RecName: Full=WEB family protein At3g56270;
GN OrderedLocusNames=At3g56270; ORFNames=F18O21_230;
OS Arabidopsis thaliana (Mouse-ear cress).
OC Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
OC Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae;
OC rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis.
OX NCBI_TaxID=3702;
RN [1]
RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC STRAIN=cv. Columbia;
RX PubMed=11130713; DOI=10.1038/35048706;
RA Salanoubat M., Lemcke K., Rieger M., Ansorge W., Unseld M., Fartmann B.,
RA Valle G., Bloecker H., Perez-Alonso M., Obermaier B., Delseny M.,
RA Boutry M., Grivell L.A., Mache R., Puigdomenech P., De Simone V.,
RA Choisne N., Artiguenave F., Robert C., Brottier P., Wincker P.,
RA Cattolico L., Weissenbach J., Saurin W., Quetier F., Schaefer M.,
RA Mueller-Auer S., Gabel C., Fuchs M., Benes V., Wurmbach E., Drzonek H.,
RA Erfle H., Jordan N., Bangert S., Wiedelmann R., Kranz H., Voss H.,
RA Holland R., Brandt P., Nyakatura G., Vezzi A., D'Angelo M., Pallavicini A.,
RA Toppo S., Simionati B., Conrad A., Hornischer K., Kauer G., Loehnert T.-H.,
RA Nordsiek G., Reichelt J., Scharfe M., Schoen O., Bargues M., Terol J.,
RA Climent J., Navarro P., Collado C., Perez-Perez A., Ottenwaelder B.,
RA Duchemin D., Cooke R., Laudie M., Berger-Llauro C., Purnelle B., Masuy D.,
RA de Haan M., Maarse A.C., Alcaraz J.-P., Cottet A., Casacuberta E.,
RA Monfort A., Argiriou A., Flores M., Liguori R., Vitale D., Mannhaupt G.,
RA Haase D., Schoof H., Rudd S., Zaccaria P., Mewes H.-W., Mayer K.F.X.,
RA Kaul S., Town C.D., Koo H.L., Tallon L.J., Jenkins J., Rooney T., Rizzo M.,
RA Walts A., Utterback T., Fujii C.Y., Shea T.P., Creasy T.H., Haas B.,
RA Maiti R., Wu D., Peterson J., Van Aken S., Pai G., Militscher J.,
RA Sellers P., Gill J.E., Feldblyum T.V., Preuss D., Lin X., Nierman W.C.,
RA Salzberg S.L., White O., Venter J.C., Fraser C.M., Kaneko T., Nakamura Y.,
RA Sato S., Kato T., Asamizu E., Sasamoto S., Kimura T., Idesawa K.,
RA Kawashima K., Kishida Y., Kiyokawa C., Kohara M., Matsumoto M., Matsuno A.,
RA Muraki A., Nakayama S., Nakazaki N., Shinpo S., Takeuchi C., Wada T.,
RA Watanabe A., Yamada M., Yasuda M., Tabata S.;
RT "Sequence and analysis of chromosome 3 of the plant Arabidopsis thaliana.";
RL Nature 408:820-822(2000).
RN [2]
RP GENOME REANNOTATION.
RC STRAIN=cv. Columbia;
RX PubMed=27862469; DOI=10.1111/tpj.13415;
RA Cheng C.Y., Krishnakumar V., Chan A.P., Thibaud-Nissen F., Schobel S.,
RA Town C.D.;
RT "Araport11: a complete reannotation of the Arabidopsis thaliana reference
RT genome.";
RL Plant J. 89:789-804(2017).
RN [3]
RP NUCLEOTIDE SEQUENCE [LARGE SCALE MRNA].
RC STRAIN=cv. Columbia;
RX PubMed=14593172; DOI=10.1126/science.1088305;
RA Yamada K., Lim J., Dale J.M., Chen H., Shinn P., Palm C.J., Southwick A.M.,
RA Wu H.C., Kim C.J., Nguyen M., Pham P.K., Cheuk R.F., Karlin-Newmann G.,
RA Liu S.X., Lam B., Sakano H., Wu T., Yu G., Miranda M., Quach H.L.,
RA Tripp M., Chang C.H., Lee J.M., Toriumi M.J., Chan M.M., Tang C.C.,
RA Onodera C.S., Deng J.M., Akiyama K., Ansari Y., Arakawa T., Banh J.,
RA Banno F., Bowser L., Brooks S.Y., Carninci P., Chao Q., Choy N., Enju A.,
RA Goldsmith A.D., Gurjal M., Hansen N.F., Hayashizaki Y., Johnson-Hopson C.,
RA Hsuan V.W., Iida K., Karnes M., Khan S., Koesema E., Ishida J., Jiang P.X.,
RA Jones T., Kawai J., Kamiya A., Meyers C., Nakajima M., Narusaka M.,
RA Seki M., Sakurai T., Satou M., Tamse R., Vaysberg M., Wallender E.K.,
RA Wong C., Yamamura Y., Yuan S., Shinozaki K., Davis R.W., Theologis A.,
RA Ecker J.R.;
RT "Empirical analysis of transcriptional activity in the Arabidopsis
RT genome.";
RL Science 302:842-846(2003).
RN [4]
RP NUCLEOTIDE SEQUENCE [LARGE SCALE MRNA].
RA Brover V.V., Troukhan M.E., Alexandrov N.A., Lu Y.-P., Flavell R.B.,
RA Feldmann K.A.;
RT "Full-length cDNA from Arabidopsis thaliana.";
RL Submitted (MAR-2002) to the EMBL/GenBank/DDBJ databases.
CC -!- INTERACTION:
CC Q9LYL6; Q9FYK5: ESR2; NbExp=3; IntAct=EBI-1238139, EBI-1536925;
CC Q9LYL6; P46639: KNAT1; NbExp=3; IntAct=EBI-1238139, EBI-530486;
CC Q9LYL6; Q38845: PP2AA1; NbExp=3; IntAct=EBI-1238139, EBI-1645478;
CC Q9LYL6; P49598: PP2CA; NbExp=3; IntAct=EBI-1238139, EBI-1764934;
CC -!- SIMILARITY: Belongs to the WEB family. {ECO:0000305}.
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DR EMBL; AL163763; CAB87426.1; -; Genomic_DNA.
DR EMBL; CP002686; AEE79504.1; -; Genomic_DNA.
DR EMBL; BT004218; AAO42235.1; -; mRNA.
DR EMBL; BT005056; AAO50589.1; -; mRNA.
DR EMBL; AY086041; AAM63251.1; -; mRNA.
DR PIR; T47744; T47744.
DR RefSeq; NP_191186.1; NM_115485.3.
DR AlphaFoldDB; Q9LYL6; -.
DR SMR; Q9LYL6; -.
DR BioGRID; 10109; 18.
DR IntAct; Q9LYL6; 20.
DR STRING; 3702.AT3G56270.1; -.
DR PaxDb; Q9LYL6; -.
DR PRIDE; Q9LYL6; -.
DR ProteomicsDB; 234605; -.
DR EnsemblPlants; AT3G56270.1; AT3G56270.1; AT3G56270.
DR GeneID; 824793; -.
DR Gramene; AT3G56270.1; AT3G56270.1; AT3G56270.
DR KEGG; ath:AT3G56270; -.
DR Araport; AT3G56270; -.
DR TAIR; locus:2078361; AT3G56270.
DR eggNOG; ENOG502RR51; Eukaryota.
DR HOGENOM; CLU_017338_2_0_1; -.
DR InParanoid; Q9LYL6; -.
DR OMA; DERCHRT; -.
DR OrthoDB; 1046380at2759; -.
DR PhylomeDB; Q9LYL6; -.
DR PRO; PR:Q9LYL6; -.
DR Proteomes; UP000006548; Chromosome 3.
DR ExpressionAtlas; Q9LYL6; baseline and differential.
DR Genevisible; Q9LYL6; AT.
DR GO; GO:0005829; C:cytosol; IBA:GO_Central.
DR GO; GO:0009904; P:chloroplast accumulation movement; IBA:GO_Central.
DR GO; GO:0009903; P:chloroplast avoidance movement; IBA:GO_Central.
PE 1: Evidence at protein level;
KW Coiled coil; Reference proteome.
FT CHAIN 1..446
FT /note="WEB family protein At3g56270"
FT /id="PRO_0000414075"
FT COILED 313..349
FT /evidence="ECO:0000255"
SQ SEQUENCE 446 AA; 51240 MW; 70DF9E8A53BF2AFC CRC64;
MAERQQSPAA ETIPGTPVIR EVRTGTGSEN FNPENTRRGC LRAEIDISPQ LYGGRGFWVP
FNLEDNYDCV GEFDIKRMEE QTVELEKDLI MKELETLDLL EALGSTKRIF EDLKWQLQQQ
ALRCKETPQH LRSHSKEMVD EHCHRNPLKS PDLMTMEMKQ AGMNLCKTMD DLALIHSYAE
SLNMKTKEEK DVLGVASLAE ELNSLKFKPA GPDQVERFNT ENLPVNPQCE QIKMVVETYD
TAFHKQSKTC PRTADMRLVA ARKMEEAARA AEALALAEMT ILSSRRNQDA LCFPKTPCFP
LTLKAQMNKE LSTNVSRIEI LRKLEEANEE VKQSKQALEV ALNRVEIASV KQLEAEEAFR
QWNIESWKDQ KAVGAKRSMK RESFPQRSFL SHINQHEPLI DLPEPMLKRN VSMGNALNRK
DEKQLVTPRR KFRFIQTHQA SIRKTE
