Y3272_ARATH
ID Y3272_ARATH Reviewed; 426 AA.
AC Q9LK31; Q93ZP9;
DT 11-SEP-2007, integrated into UniProtKB/Swiss-Prot.
DT 01-OCT-2000, sequence version 1.
DT 03-AUG-2022, entry version 126.
DE RecName: Full=Kelch repeat-containing protein At3g27220;
GN OrderedLocusNames=At3g27220; ORFNames=K17E12.4;
OS Arabidopsis thaliana (Mouse-ear cress).
OC Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
OC Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae;
OC rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis.
OX NCBI_TaxID=3702;
RN [1]
RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC STRAIN=cv. Columbia;
RX PubMed=10907853; DOI=10.1093/dnares/7.3.217;
RA Kaneko T., Katoh T., Sato S., Nakamura Y., Asamizu E., Tabata S.;
RT "Structural analysis of Arabidopsis thaliana chromosome 3. II. Sequence
RT features of the 4,251,695 bp regions covered by 90 P1, TAC and BAC
RT clones.";
RL DNA Res. 7:217-221(2000).
RN [2]
RP GENOME REANNOTATION.
RC STRAIN=cv. Columbia;
RX PubMed=27862469; DOI=10.1111/tpj.13415;
RA Cheng C.Y., Krishnakumar V., Chan A.P., Thibaud-Nissen F., Schobel S.,
RA Town C.D.;
RT "Araport11: a complete reannotation of the Arabidopsis thaliana reference
RT genome.";
RL Plant J. 89:789-804(2017).
RN [3]
RP NUCLEOTIDE SEQUENCE [LARGE SCALE MRNA].
RC STRAIN=cv. Columbia;
RX PubMed=14593172; DOI=10.1126/science.1088305;
RA Yamada K., Lim J., Dale J.M., Chen H., Shinn P., Palm C.J., Southwick A.M.,
RA Wu H.C., Kim C.J., Nguyen M., Pham P.K., Cheuk R.F., Karlin-Newmann G.,
RA Liu S.X., Lam B., Sakano H., Wu T., Yu G., Miranda M., Quach H.L.,
RA Tripp M., Chang C.H., Lee J.M., Toriumi M.J., Chan M.M., Tang C.C.,
RA Onodera C.S., Deng J.M., Akiyama K., Ansari Y., Arakawa T., Banh J.,
RA Banno F., Bowser L., Brooks S.Y., Carninci P., Chao Q., Choy N., Enju A.,
RA Goldsmith A.D., Gurjal M., Hansen N.F., Hayashizaki Y., Johnson-Hopson C.,
RA Hsuan V.W., Iida K., Karnes M., Khan S., Koesema E., Ishida J., Jiang P.X.,
RA Jones T., Kawai J., Kamiya A., Meyers C., Nakajima M., Narusaka M.,
RA Seki M., Sakurai T., Satou M., Tamse R., Vaysberg M., Wallender E.K.,
RA Wong C., Yamamura Y., Yuan S., Shinozaki K., Davis R.W., Theologis A.,
RA Ecker J.R.;
RT "Empirical analysis of transcriptional activity in the Arabidopsis
RT genome.";
RL Science 302:842-846(2003).
CC -!- SUBCELLULAR LOCATION: Membrane {ECO:0000255}; Single-pass membrane
CC protein {ECO:0000255}.
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DR EMBL; AP000381; BAB02117.1; -; Genomic_DNA.
DR EMBL; CP002686; AEE77280.1; -; Genomic_DNA.
DR EMBL; AY048270; AAK82532.1; -; mRNA.
DR EMBL; BT000591; AAN18160.1; -; mRNA.
DR EMBL; AY056400; AAL08256.1; -; mRNA.
DR RefSeq; NP_566812.1; NM_113636.4.
DR AlphaFoldDB; Q9LK31; -.
DR SMR; Q9LK31; -.
DR BioGRID; 7671; 3.
DR STRING; 3702.AT3G27220.1; -.
DR PaxDb; Q9LK31; -.
DR PRIDE; Q9LK31; -.
DR ProteomicsDB; 232370; -.
DR EnsemblPlants; AT3G27220.1; AT3G27220.1; AT3G27220.
DR GeneID; 822341; -.
DR Gramene; AT3G27220.1; AT3G27220.1; AT3G27220.
DR KEGG; ath:AT3G27220; -.
DR Araport; AT3G27220; -.
DR TAIR; locus:2086528; AT3G27220.
DR eggNOG; KOG1072; Eukaryota.
DR HOGENOM; CLU_056092_0_0_1; -.
DR InParanoid; Q9LK31; -.
DR OMA; FWNGYLY; -.
DR OrthoDB; 1562595at2759; -.
DR PhylomeDB; Q9LK31; -.
DR PRO; PR:Q9LK31; -.
DR Proteomes; UP000006548; Chromosome 3.
DR ExpressionAtlas; Q9LK31; baseline and differential.
DR Genevisible; Q9LK31; AT.
DR GO; GO:0005768; C:endosome; HDA:TAIR.
DR GO; GO:0005794; C:Golgi apparatus; HDA:TAIR.
DR GO; GO:0005797; C:Golgi medial cisterna; HDA:TAIR.
DR GO; GO:0016021; C:integral component of membrane; IEA:UniProtKB-KW.
DR GO; GO:0005802; C:trans-Golgi network; HDA:TAIR.
DR GO; GO:0009061; P:anaerobic respiration; IMP:TAIR.
DR GO; GO:0071456; P:cellular response to hypoxia; HEP:TAIR.
DR Gene3D; 2.120.10.80; -; 2.
DR InterPro; IPR015915; Kelch-typ_b-propeller.
DR SUPFAM; SSF117281; SSF117281; 2.
PE 2: Evidence at transcript level;
KW Kelch repeat; Membrane; Reference proteome; Repeat; Transmembrane;
KW Transmembrane helix.
FT CHAIN 1..426
FT /note="Kelch repeat-containing protein At3g27220"
FT /id="PRO_0000300098"
FT TRANSMEM 18..38
FT /note="Helical"
FT /evidence="ECO:0000255"
FT REPEAT 123..170
FT /note="Kelch 1"
FT REPEAT 173..222
FT /note="Kelch 2"
FT REPEAT 224..275
FT /note="Kelch 3"
FT REPEAT 276..338
FT /note="Kelch 4"
FT REPEAT 341..394
FT /note="Kelch 5"
FT CONFLICT 300
FT /note="R -> H (in Ref. 3; AAL08256)"
FT /evidence="ECO:0000305"
SQ SEQUENCE 426 AA; 48496 MW; EAF7A4910790FE5B CRC64;
MANKPDHHHH HHQSSRRLML VLYFTSVLGI GFIAAFLCLS SSIPSVSAVF SIWVPVNRPE
IQIPIIDSKI VQKRSKQSND TKDHVRFLSA IFADIPAPEL KWEEMESAPV PRLDGYSVQI
NNLLYVFSGY GSLDYVHSHV DVFNFTDNKW CDRFHTPKEM ANSHLGIVTD GRYVYVVSGQ
LGPQCRGPTS RSFVLDSFTK TWLEFPSLPA PRYAPATQIW RGRLHVMGGS KENRNAVAFD
HWSIAVKDGK ALDEWREEVP IPRGGPHRAC VVANDKLLVI GGQEGDFMAK PNSPIFKCSR
RREIFNGEVY MMDEEMKWKM LPPMPKNNSH IESAWIIVNN SIVIVGGTTD WHPVTKRLVL
VGEIFRFQLD TLTWSVIGRL PYRVKTAMAG FWNGYLYFTS GQRDRGPDNP QPGKVIGEMW
RTKLKF