Y3307_ARATH
ID Y3307_ARATH Reviewed; 661 AA.
AC Q9LK65;
DT 27-JUL-2011, integrated into UniProtKB/Swiss-Prot.
DT 01-OCT-2000, sequence version 1.
DT 25-MAY-2022, entry version 118.
DE RecName: Full=Putative DUF21 domain-containing protein At3g13070, chloroplastic;
DE AltName: Full=CBS domain-containing protein CBSDUFCH1;
DE Flags: Precursor;
GN Name=CBSDUFCH1; OrderedLocusNames=At3g13070; ORFNames=MJG19.2;
OS Arabidopsis thaliana (Mouse-ear cress).
OC Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
OC Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae;
OC rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis.
OX NCBI_TaxID=3702;
RN [1]
RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC STRAIN=cv. Columbia;
RX PubMed=10907853; DOI=10.1093/dnares/7.3.217;
RA Kaneko T., Katoh T., Sato S., Nakamura Y., Asamizu E., Tabata S.;
RT "Structural analysis of Arabidopsis thaliana chromosome 3. II. Sequence
RT features of the 4,251,695 bp regions covered by 90 P1, TAC and BAC
RT clones.";
RL DNA Res. 7:217-221(2000).
RN [2]
RP GENOME REANNOTATION.
RC STRAIN=cv. Columbia;
RX PubMed=27862469; DOI=10.1111/tpj.13415;
RA Cheng C.Y., Krishnakumar V., Chan A.P., Thibaud-Nissen F., Schobel S.,
RA Town C.D.;
RT "Araport11: a complete reannotation of the Arabidopsis thaliana reference
RT genome.";
RL Plant J. 89:789-804(2017).
RN [3]
RP GENE FAMILY, AND NOMENCLATURE.
RX PubMed=19400948; DOI=10.1186/1471-2164-10-200;
RA Kushwaha H.R., Singh A.K., Sopory S.K., Singla-Pareek S.L., Pareek A.;
RT "Genome wide expression analysis of CBS domain containing proteins in
RT Arabidopsis thaliana (L.) Heynh and Oryza sativa L. reveals their
RT developmental and stress regulation.";
RL BMC Genomics 10:200-200(2009).
CC -!- SUBCELLULAR LOCATION: Plastid, chloroplast membrane {ECO:0000305};
CC Multi-pass membrane protein {ECO:0000305}.
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DR EMBL; AP000375; BAB01398.1; -; Genomic_DNA.
DR EMBL; CP002686; AEE75290.1; -; Genomic_DNA.
DR RefSeq; NP_187914.1; NM_112146.3.
DR AlphaFoldDB; Q9LK65; -.
DR SMR; Q9LK65; -.
DR STRING; 3702.AT3G13070.1; -.
DR iPTMnet; Q9LK65; -.
DR MetOSite; Q9LK65; -.
DR PaxDb; Q9LK65; -.
DR PRIDE; Q9LK65; -.
DR ProteomicsDB; 232372; -.
DR EnsemblPlants; AT3G13070.1; AT3G13070.1; AT3G13070.
DR GeneID; 820495; -.
DR Gramene; AT3G13070.1; AT3G13070.1; AT3G13070.
DR KEGG; ath:AT3G13070; -.
DR Araport; AT3G13070; -.
DR TAIR; locus:2090024; AT3G13070.
DR eggNOG; KOG2118; Eukaryota.
DR HOGENOM; CLU_015237_4_4_1; -.
DR InParanoid; Q9LK65; -.
DR OMA; GHEVFGQ; -.
DR OrthoDB; 1369392at2759; -.
DR PhylomeDB; Q9LK65; -.
DR PRO; PR:Q9LK65; -.
DR Proteomes; UP000006548; Chromosome 3.
DR ExpressionAtlas; Q9LK65; baseline and differential.
DR Genevisible; Q9LK65; AT.
DR GO; GO:0009941; C:chloroplast envelope; HDA:TAIR.
DR GO; GO:0031969; C:chloroplast membrane; IEA:UniProtKB-SubCell.
DR GO; GO:0005829; C:cytosol; HDA:TAIR.
DR GO; GO:0016021; C:integral component of membrane; IEA:UniProtKB-KW.
DR GO; GO:0050660; F:flavin adenine dinucleotide binding; IEA:InterPro.
DR CDD; cd04590; CBS_pair_CorC_HlyC_assoc; 1.
DR Gene3D; 3.10.580.10; -; 1.
DR Gene3D; 3.30.465.10; -; 1.
DR InterPro; IPR000644; CBS_dom.
DR InterPro; IPR046342; CBS_dom_sf.
DR InterPro; IPR002550; CNNM.
DR InterPro; IPR036318; FAD-bd_PCMH-like_sf.
DR InterPro; IPR016169; FAD-bd_PCMH_sub2.
DR InterPro; IPR044751; Ion_transp-like_CBS.
DR InterPro; IPR005170; Transptr-assoc_dom.
DR Pfam; PF00571; CBS; 2.
DR Pfam; PF03471; CorC_HlyC; 1.
DR Pfam; PF01595; DUF21; 1.
DR SMART; SM00116; CBS; 2.
DR SMART; SM01091; CorC_HlyC; 1.
DR SUPFAM; SSF54631; SSF54631; 1.
DR SUPFAM; SSF56176; SSF56176; 1.
DR PROSITE; PS51371; CBS; 2.
DR PROSITE; PS51846; CNNM; 1.
PE 4: Predicted;
KW CBS domain; Chloroplast; Membrane; Plastid; Reference proteome; Repeat;
KW Transit peptide; Transmembrane; Transmembrane helix; Transport.
FT TRANSIT 1..71
FT /note="Chloroplast"
FT /evidence="ECO:0000255"
FT CHAIN 72..661
FT /note="Putative DUF21 domain-containing protein At3g13070,
FT chloroplastic"
FT /id="PRO_0000411685"
FT TRANSMEM 105..125
FT /note="Helical"
FT /evidence="ECO:0000255"
FT TRANSMEM 162..182
FT /note="Helical"
FT /evidence="ECO:0000255"
FT TRANSMEM 213..233
FT /note="Helical"
FT /evidence="ECO:0000255"
FT TRANSMEM 239..259
FT /note="Helical"
FT /evidence="ECO:0000255"
FT TRANSMEM 285..305
FT /note="Helical"
FT /evidence="ECO:0000255"
FT DOMAIN 154..340
FT /note="CNNM transmembrane"
FT /evidence="ECO:0000255|PROSITE-ProRule:PRU01193"
FT DOMAIN 359..420
FT /note="CBS 1"
FT /evidence="ECO:0000255|PROSITE-ProRule:PRU00703"
FT DOMAIN 426..484
FT /note="CBS 2"
FT /evidence="ECO:0000255|PROSITE-ProRule:PRU00703"
FT REGION 559..578
FT /note="Disordered"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT REGION 628..661
FT /note="Disordered"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT COMPBIAS 644..661
FT /note="Basic and acidic residues"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
SQ SEQUENCE 661 AA; 73753 MW; 609C73986974C8E7 CRC64;
MMGMALELSV LGRSVIDSKT LNLKRYGQKS KLSGRFLPRA ELHCPVALSS SKHSNLSFRF
RRSCEFSYRS RFMLFSSSQC HEGSQRKSDS GEKELESIKV LLKRGIVIGA LVCGVFLYGC
QKVLASAGVV EAGYEVFGQS VVLFKNALPK IYQVLTVLRE QGLILAALLS LSAFFSMAET
SITTLWPWKV RELAEKEPEN GVFRMLRSDV TRFLTTILIG TTVVNIAATA LVTEAATAIF
GEAGVSAATG LMTVAILLLT EITPKSVAVH NAQEVARIVV RPVAWLSLVL YPVGRIVTYL
SMGILKILGL KGRSEPYVTE DELKLMLRGA ELSGAIEEEE QDMIENVLEI KDTHVREVMT
PLVDVVAIDA SASLVDFHSM WVTHQYSRVP VFEQRIDNIV GIAYAMDLLD YVQKGDLLES
TSVGDMAHKP AYFVPDSMSV WNLLREFRIR KVHMAVVLNE YGGTIGIVTL EDVVEEIVGE
IFDENDSKEE IQKKTGYIVM RDEGIYDVDA NTSIDQLSEE LNMKMPEGIQ YETVSGFVCE
AFGYIPKTGE SVKVVLEKES WEEDGEEEEG KQERQEPKEK NQIYRVEILA GNARKVSAVR
FERVNDMDQV SEASDVKSMV PKFVRKWSSE EDDGNLSNEE DQSENAVLDE HVLADNSKKQ
Q
