Y3477_ARATH
ID Y3477_ARATH Reviewed; 318 AA.
AC Q5BPP4; O22236;
DT 10-FEB-2009, integrated into UniProtKB/Swiss-Prot.
DT 12-APR-2005, sequence version 1.
DT 25-MAY-2022, entry version 79.
DE RecName: Full=UPF0725 protein At3g44770;
GN OrderedLocusNames=At3g44770; ORFNames=T32N15.6;
OS Arabidopsis thaliana (Mouse-ear cress).
OC Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
OC Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae;
OC rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis.
OX NCBI_TaxID=3702;
RN [1]
RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC STRAIN=cv. Columbia;
RX PubMed=11130713; DOI=10.1038/35048706;
RA Salanoubat M., Lemcke K., Rieger M., Ansorge W., Unseld M., Fartmann B.,
RA Valle G., Bloecker H., Perez-Alonso M., Obermaier B., Delseny M.,
RA Boutry M., Grivell L.A., Mache R., Puigdomenech P., De Simone V.,
RA Choisne N., Artiguenave F., Robert C., Brottier P., Wincker P.,
RA Cattolico L., Weissenbach J., Saurin W., Quetier F., Schaefer M.,
RA Mueller-Auer S., Gabel C., Fuchs M., Benes V., Wurmbach E., Drzonek H.,
RA Erfle H., Jordan N., Bangert S., Wiedelmann R., Kranz H., Voss H.,
RA Holland R., Brandt P., Nyakatura G., Vezzi A., D'Angelo M., Pallavicini A.,
RA Toppo S., Simionati B., Conrad A., Hornischer K., Kauer G., Loehnert T.-H.,
RA Nordsiek G., Reichelt J., Scharfe M., Schoen O., Bargues M., Terol J.,
RA Climent J., Navarro P., Collado C., Perez-Perez A., Ottenwaelder B.,
RA Duchemin D., Cooke R., Laudie M., Berger-Llauro C., Purnelle B., Masuy D.,
RA de Haan M., Maarse A.C., Alcaraz J.-P., Cottet A., Casacuberta E.,
RA Monfort A., Argiriou A., Flores M., Liguori R., Vitale D., Mannhaupt G.,
RA Haase D., Schoof H., Rudd S., Zaccaria P., Mewes H.-W., Mayer K.F.X.,
RA Kaul S., Town C.D., Koo H.L., Tallon L.J., Jenkins J., Rooney T., Rizzo M.,
RA Walts A., Utterback T., Fujii C.Y., Shea T.P., Creasy T.H., Haas B.,
RA Maiti R., Wu D., Peterson J., Van Aken S., Pai G., Militscher J.,
RA Sellers P., Gill J.E., Feldblyum T.V., Preuss D., Lin X., Nierman W.C.,
RA Salzberg S.L., White O., Venter J.C., Fraser C.M., Kaneko T., Nakamura Y.,
RA Sato S., Kato T., Asamizu E., Sasamoto S., Kimura T., Idesawa K.,
RA Kawashima K., Kishida Y., Kiyokawa C., Kohara M., Matsumoto M., Matsuno A.,
RA Muraki A., Nakayama S., Nakazaki N., Shinpo S., Takeuchi C., Wada T.,
RA Watanabe A., Yamada M., Yasuda M., Tabata S.;
RT "Sequence and analysis of chromosome 3 of the plant Arabidopsis thaliana.";
RL Nature 408:820-822(2000).
RN [2]
RP GENOME REANNOTATION.
RC STRAIN=cv. Columbia;
RX PubMed=27862469; DOI=10.1111/tpj.13415;
RA Cheng C.Y., Krishnakumar V., Chan A.P., Thibaud-Nissen F., Schobel S.,
RA Town C.D.;
RT "Araport11: a complete reannotation of the Arabidopsis thaliana reference
RT genome.";
RL Plant J. 89:789-804(2017).
RN [3]
RP NUCLEOTIDE SEQUENCE [LARGE SCALE MRNA].
RC STRAIN=cv. Columbia;
RX PubMed=16244158; DOI=10.1104/pp.105.063479;
RA Xiao Y.-L., Smith S.R., Ishmael N., Redman J.C., Kumar N., Monaghan E.L.,
RA Ayele M., Haas B.J., Wu H.C., Town C.D.;
RT "Analysis of the cDNAs of hypothetical genes on Arabidopsis chromosome 2
RT reveals numerous transcript variants.";
RL Plant Physiol. 139:1323-1337(2005).
RN [4]
RP NUCLEOTIDE SEQUENCE [LARGE SCALE MRNA].
RC STRAIN=cv. Columbia;
RA Underwood B.A., Xiao Y.-L., Moskal W.A. Jr., Monaghan E.L., Wang W.,
RA Redman J.C., Wu H.C., Utterback T., Town C.D.;
RL Submitted (FEB-2005) to the EMBL/GenBank/DDBJ databases.
CC -!- ALTERNATIVE PRODUCTS:
CC Event=Alternative splicing; Named isoforms=1;
CC Comment=A number of isoforms are produced. According to EST
CC sequences.;
CC Name=1;
CC IsoId=Q5BPP4-1; Sequence=Displayed;
CC -!- SIMILARITY: Belongs to the UPF0725 (EMB2204) family. {ECO:0000305}.
CC -!- SEQUENCE CAUTION:
CC Sequence=AAB70030.1; Type=Erroneous gene model prediction; Evidence={ECO:0000305};
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DR EMBL; AC002534; AAB70030.1; ALT_SEQ; Genomic_DNA.
DR EMBL; CP002686; AEE77949.1; -; Genomic_DNA.
DR EMBL; DQ132692; AAZ52722.1; -; mRNA.
DR EMBL; AY924784; AAX23859.1; -; mRNA.
DR RefSeq; NP_001154664.1; NM_001161192.2. [Q5BPP4-1]
DR RefSeq; NP_190063.1; NM_114346.2.
DR AlphaFoldDB; Q5BPP4; -.
DR SMR; Q5BPP4; -.
DR PaxDb; Q5BPP4; -.
DR PRIDE; Q5BPP4; -.
DR ProteomicsDB; 234634; -. [Q5BPP4-1]
DR EnsemblPlants; AT3G44770.2; AT3G44770.2; AT3G44770. [Q5BPP4-1]
DR GeneID; 823608; -.
DR Gramene; AT3G44770.2; AT3G44770.2; AT3G44770. [Q5BPP4-1]
DR KEGG; ath:AT3G44770; -.
DR Araport; AT3G44770; -.
DR HOGENOM; CLU_053767_2_1_1; -.
DR OMA; ILQISTW; -.
DR OrthoDB; 1148596at2759; -.
DR PhylomeDB; Q5BPP4; -.
DR PRO; PR:Q5BPP4; -.
DR Proteomes; UP000006548; Chromosome 3.
DR ExpressionAtlas; Q5BPP4; baseline and differential.
DR InterPro; IPR006462; MS5.
DR PANTHER; PTHR31260; PTHR31260; 1.
DR Pfam; PF04776; protein_MS5; 1.
DR TIGRFAMs; TIGR01572; A_thl_para_3677; 1.
PE 2: Evidence at transcript level;
KW Alternative splicing; Reference proteome.
FT CHAIN 1..318
FT /note="UPF0725 protein At3g44770"
FT /id="PRO_0000363125"
SQ SEQUENCE 318 AA; 36476 MW; 8029C948ECE54B54 CRC64;
MADILRQLLD CGKLSDETCH SILCGLGQHV DALHLSKTEE EVDGWTSEED EELDQEYCRQ
VTESLGFDID GKVCIPACGI SPVFLGANKN PRSEVALYGR LGVHCFNIDK ERKFQYMRIP
KYNVQYPEAM SFHITVEVND LADNSAHTLQ NLVTRSFSRN GEDLRVSTGI CRIKPKTPER
EICLVDEEAI DKFYRGVMPN FVSKLGADDD KLRFYEVQEQ DVCANDWLRL YTEFALFSYW
RYNEDGFESC LPVEIKKIIV ETCDTHREPR MKLKSSNAIF HINFNAKSCD YKSVSRRTTD
GKPGHIVLEI NTWKLSST