Y3524_METAC
ID Y3524_METAC Reviewed; 328 AA.
AC Q8TK90;
DT 25-OCT-2002, integrated into UniProtKB/Swiss-Prot.
DT 01-JUN-2002, sequence version 1.
DT 25-MAY-2022, entry version 111.
DE RecName: Full=Putative HTH-type transcriptional regulatory protein MA_3524 {ECO:0000255|HAMAP-Rule:MF_00584};
GN OrderedLocusNames=MA_3524;
OS Methanosarcina acetivorans (strain ATCC 35395 / DSM 2834 / JCM 12185 /
OS C2A).
OC Archaea; Euryarchaeota; Stenosarchaea group; Methanomicrobia;
OC Methanosarcinales; Methanosarcinaceae; Methanosarcina.
OX NCBI_TaxID=188937;
RN [1]
RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC STRAIN=ATCC 35395 / DSM 2834 / JCM 12185 / C2A;
RX PubMed=11932238; DOI=10.1101/gr.223902;
RA Galagan J.E., Nusbaum C., Roy A., Endrizzi M.G., Macdonald P., FitzHugh W.,
RA Calvo S., Engels R., Smirnov S., Atnoor D., Brown A., Allen N., Naylor J.,
RA Stange-Thomann N., DeArellano K., Johnson R., Linton L., McEwan P.,
RA McKernan K., Talamas J., Tirrell A., Ye W., Zimmer A., Barber R.D.,
RA Cann I., Graham D.E., Grahame D.A., Guss A.M., Hedderich R.,
RA Ingram-Smith C., Kuettner H.C., Krzycki J.A., Leigh J.A., Li W., Liu J.,
RA Mukhopadhyay B., Reeve J.N., Smith K., Springer T.A., Umayam L.A.,
RA White O., White R.H., de Macario E.C., Ferry J.G., Jarrell K.F., Jing H.,
RA Macario A.J.L., Paulsen I.T., Pritchett M., Sowers K.R., Swanson R.V.,
RA Zinder S.H., Lander E., Metcalf W.W., Birren B.;
RT "The genome of Methanosarcina acetivorans reveals extensive metabolic and
RT physiological diversity.";
RL Genome Res. 12:532-542(2002).
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DR EMBL; AE010299; AAM06887.1; -; Genomic_DNA.
DR RefSeq; WP_011023440.1; NC_003552.1.
DR AlphaFoldDB; Q8TK90; -.
DR SMR; Q8TK90; -.
DR STRING; 188937.MA_3524; -.
DR EnsemblBacteria; AAM06887; AAM06887; MA_3524.
DR GeneID; 1475418; -.
DR KEGG; mac:MA_3524; -.
DR HOGENOM; CLU_075726_0_0_2; -.
DR InParanoid; Q8TK90; -.
DR OMA; PGVVYFR; -.
DR OrthoDB; 76134at2157; -.
DR PhylomeDB; Q8TK90; -.
DR Proteomes; UP000002487; Chromosome.
DR GO; GO:0003677; F:DNA binding; IEA:UniProtKB-KW.
DR GO; GO:0003700; F:DNA-binding transcription factor activity; IEA:UniProtKB-UniRule.
DR CDD; cd00093; HTH_XRE; 1.
DR Gene3D; 1.10.260.40; -; 1.
DR HAMAP; MF_00584; HTH_type_cro_C1; 1.
DR InterPro; IPR020886; Arc_TR_HTH.
DR InterPro; IPR001387; Cro/C1-type_HTH.
DR InterPro; IPR010982; Lambda_DNA-bd_dom_sf.
DR Pfam; PF01381; HTH_3; 1.
DR SMART; SM00530; HTH_XRE; 1.
DR SUPFAM; SSF47413; SSF47413; 1.
DR PROSITE; PS50943; HTH_CROC1; 1.
PE 3: Inferred from homology;
KW DNA-binding; Reference proteome; Transcription; Transcription regulation.
FT CHAIN 1..328
FT /note="Putative HTH-type transcriptional regulatory protein
FT MA_3524"
FT /id="PRO_0000144855"
FT DOMAIN 132..190
FT /note="HTH cro/C1-type"
FT /evidence="ECO:0000255|HAMAP-Rule:MF_00584"
FT DNA_BIND 143..162
FT /note="H-T-H motif"
FT /evidence="ECO:0000255|HAMAP-Rule:MF_00584"
SQ SEQUENCE 328 AA; 36458 MW; 45D13BE362D8AB0F CRC64;
MTKEVLIHQI IDVLSRAGFA LSDRCNIRPR SFDVAARKDE TLLLCKVLFN IDGLNEETAR
EMKYLAEYLG GSAIVVGAKT RDQMLEDSVV YMRYDILALN VQTLYDYFVE NIKPLVSAAP
GGLYISIEGD LLKKARTDQS MSLGTLASMV GVSRRTISKY EEEGMDASID VVLQLEDIFG
VELARPIDIL KSCGSRKPRK KAEPEKEDPQ VKHNALLPED LILNTISMLG YDVLPTAQAP
FKAISRDKSS VILTGVSEFN TTVVKRAHLM SSISCITETQ SVFIINGRSK LKSVENTALI
EKKELDKISD SQELLEFIEE RKDTNSGA