Y3565_ARATH
ID Y3565_ARATH Reviewed; 499 AA.
AC Q9LYN6;
DT 30-NOV-2010, integrated into UniProtKB/Swiss-Prot.
DT 01-OCT-2000, sequence version 1.
DT 03-AUG-2022, entry version 141.
DE RecName: Full=Probable inactive receptor-like protein kinase At3g56050;
DE Flags: Precursor;
GN OrderedLocusNames=At3g56050; ORFNames=F18O21.10;
OS Arabidopsis thaliana (Mouse-ear cress).
OC Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
OC Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae;
OC rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis.
OX NCBI_TaxID=3702;
RN [1]
RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC STRAIN=cv. Columbia;
RX PubMed=11130713; DOI=10.1038/35048706;
RA Salanoubat M., Lemcke K., Rieger M., Ansorge W., Unseld M., Fartmann B.,
RA Valle G., Bloecker H., Perez-Alonso M., Obermaier B., Delseny M.,
RA Boutry M., Grivell L.A., Mache R., Puigdomenech P., De Simone V.,
RA Choisne N., Artiguenave F., Robert C., Brottier P., Wincker P.,
RA Cattolico L., Weissenbach J., Saurin W., Quetier F., Schaefer M.,
RA Mueller-Auer S., Gabel C., Fuchs M., Benes V., Wurmbach E., Drzonek H.,
RA Erfle H., Jordan N., Bangert S., Wiedelmann R., Kranz H., Voss H.,
RA Holland R., Brandt P., Nyakatura G., Vezzi A., D'Angelo M., Pallavicini A.,
RA Toppo S., Simionati B., Conrad A., Hornischer K., Kauer G., Loehnert T.-H.,
RA Nordsiek G., Reichelt J., Scharfe M., Schoen O., Bargues M., Terol J.,
RA Climent J., Navarro P., Collado C., Perez-Perez A., Ottenwaelder B.,
RA Duchemin D., Cooke R., Laudie M., Berger-Llauro C., Purnelle B., Masuy D.,
RA de Haan M., Maarse A.C., Alcaraz J.-P., Cottet A., Casacuberta E.,
RA Monfort A., Argiriou A., Flores M., Liguori R., Vitale D., Mannhaupt G.,
RA Haase D., Schoof H., Rudd S., Zaccaria P., Mewes H.-W., Mayer K.F.X.,
RA Kaul S., Town C.D., Koo H.L., Tallon L.J., Jenkins J., Rooney T., Rizzo M.,
RA Walts A., Utterback T., Fujii C.Y., Shea T.P., Creasy T.H., Haas B.,
RA Maiti R., Wu D., Peterson J., Van Aken S., Pai G., Militscher J.,
RA Sellers P., Gill J.E., Feldblyum T.V., Preuss D., Lin X., Nierman W.C.,
RA Salzberg S.L., White O., Venter J.C., Fraser C.M., Kaneko T., Nakamura Y.,
RA Sato S., Kato T., Asamizu E., Sasamoto S., Kimura T., Idesawa K.,
RA Kawashima K., Kishida Y., Kiyokawa C., Kohara M., Matsumoto M., Matsuno A.,
RA Muraki A., Nakayama S., Nakazaki N., Shinpo S., Takeuchi C., Wada T.,
RA Watanabe A., Yamada M., Yasuda M., Tabata S.;
RT "Sequence and analysis of chromosome 3 of the plant Arabidopsis thaliana.";
RL Nature 408:820-822(2000).
RN [2]
RP GENOME REANNOTATION.
RC STRAIN=cv. Columbia;
RX PubMed=27862469; DOI=10.1111/tpj.13415;
RA Cheng C.Y., Krishnakumar V., Chan A.P., Thibaud-Nissen F., Schobel S.,
RA Town C.D.;
RT "Araport11: a complete reannotation of the Arabidopsis thaliana reference
RT genome.";
RL Plant J. 89:789-804(2017).
RN [3]
RP NUCLEOTIDE SEQUENCE [LARGE SCALE MRNA].
RC STRAIN=cv. Columbia;
RX PubMed=14593172; DOI=10.1126/science.1088305;
RA Yamada K., Lim J., Dale J.M., Chen H., Shinn P., Palm C.J., Southwick A.M.,
RA Wu H.C., Kim C.J., Nguyen M., Pham P.K., Cheuk R.F., Karlin-Newmann G.,
RA Liu S.X., Lam B., Sakano H., Wu T., Yu G., Miranda M., Quach H.L.,
RA Tripp M., Chang C.H., Lee J.M., Toriumi M.J., Chan M.M., Tang C.C.,
RA Onodera C.S., Deng J.M., Akiyama K., Ansari Y., Arakawa T., Banh J.,
RA Banno F., Bowser L., Brooks S.Y., Carninci P., Chao Q., Choy N., Enju A.,
RA Goldsmith A.D., Gurjal M., Hansen N.F., Hayashizaki Y., Johnson-Hopson C.,
RA Hsuan V.W., Iida K., Karnes M., Khan S., Koesema E., Ishida J., Jiang P.X.,
RA Jones T., Kawai J., Kamiya A., Meyers C., Nakajima M., Narusaka M.,
RA Seki M., Sakurai T., Satou M., Tamse R., Vaysberg M., Wallender E.K.,
RA Wong C., Yamamura Y., Yuan S., Shinozaki K., Davis R.W., Theologis A.,
RA Ecker J.R.;
RT "Empirical analysis of transcriptional activity in the Arabidopsis
RT genome.";
RL Science 302:842-846(2003).
RN [4]
RP NUCLEOTIDE SEQUENCE [LARGE SCALE MRNA].
RC TISSUE=Leaf;
RA Stracke R., Palme K.;
RT "Signal peptide selection derived cDNAs from Arabidopsis thaliana leaves
RT and guard cells.";
RL Submitted (AUG-1998) to the EMBL/GenBank/DDBJ databases.
CC -!- SUBCELLULAR LOCATION: Cell membrane {ECO:0000250}; Single-pass type I
CC membrane protein {ECO:0000250}.
CC -!- DOMAIN: The protein kinase domain is predicted to be catalytically
CC inactive.
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DR EMBL; AL163763; CAB87404.1; -; Genomic_DNA.
DR EMBL; CP002686; AEE79470.1; -; Genomic_DNA.
DR EMBL; CP002686; AEE79471.1; -; Genomic_DNA.
DR EMBL; AY046021; AAK76695.1; -; mRNA.
DR EMBL; AY091435; AAM14374.1; -; mRNA.
DR EMBL; AY099821; AAM20672.1; -; mRNA.
DR EMBL; BT000328; AAN15647.1; -; mRNA.
DR EMBL; AF083761; AAN60319.1; -; mRNA.
DR PIR; T47722; T47722.
DR RefSeq; NP_001078300.1; NM_001084831.2.
DR RefSeq; NP_191164.1; NM_115463.4.
DR AlphaFoldDB; Q9LYN6; -.
DR SMR; Q9LYN6; -.
DR STRING; 3702.AT3G56050.1; -.
DR PaxDb; Q9LYN6; -.
DR PRIDE; Q9LYN6; -.
DR ProteomicsDB; 242866; -.
DR EnsemblPlants; AT3G56050.1; AT3G56050.1; AT3G56050.
DR EnsemblPlants; AT3G56050.2; AT3G56050.2; AT3G56050.
DR GeneID; 824771; -.
DR Gramene; AT3G56050.1; AT3G56050.1; AT3G56050.
DR Gramene; AT3G56050.2; AT3G56050.2; AT3G56050.
DR KEGG; ath:AT3G56050; -.
DR Araport; AT3G56050; -.
DR TAIR; locus:2078436; AT3G56050.
DR eggNOG; KOG1187; Eukaryota.
DR HOGENOM; CLU_000288_92_4_1; -.
DR InParanoid; Q9LYN6; -.
DR OMA; KICVRED; -.
DR OrthoDB; 454863at2759; -.
DR PhylomeDB; Q9LYN6; -.
DR PRO; PR:Q9LYN6; -.
DR Proteomes; UP000006548; Chromosome 3.
DR ExpressionAtlas; Q9LYN6; baseline and differential.
DR Genevisible; Q9LYN6; AT.
DR GO; GO:0016021; C:integral component of membrane; IEA:UniProtKB-KW.
DR GO; GO:0005886; C:plasma membrane; IEA:UniProtKB-SubCell.
DR GO; GO:0005524; F:ATP binding; IEA:InterPro.
DR GO; GO:0004672; F:protein kinase activity; IEA:InterPro.
DR GO; GO:0006468; P:protein phosphorylation; IEA:InterPro.
DR InterPro; IPR011009; Kinase-like_dom_sf.
DR InterPro; IPR000719; Prot_kinase_dom.
DR InterPro; IPR001245; Ser-Thr/Tyr_kinase_cat_dom.
DR Pfam; PF07714; PK_Tyr_Ser-Thr; 1.
DR SUPFAM; SSF56112; SSF56112; 1.
DR PROSITE; PS50011; PROTEIN_KINASE_DOM; 1.
PE 2: Evidence at transcript level;
KW Cell membrane; Glycoprotein; Membrane; Reference proteome; Signal;
KW Transmembrane; Transmembrane helix.
FT SIGNAL 1..31
FT /evidence="ECO:0000255"
FT CHAIN 32..499
FT /note="Probable inactive receptor-like protein kinase
FT At3g56050"
FT /id="PRO_0000401348"
FT TOPO_DOM 32..146
FT /note="Extracellular"
FT /evidence="ECO:0000255"
FT TRANSMEM 147..167
FT /note="Helical"
FT /evidence="ECO:0000255"
FT TOPO_DOM 168..499
FT /note="Cytoplasmic"
FT /evidence="ECO:0000255"
FT DOMAIN 208..474
FT /note="Protein kinase"
FT /evidence="ECO:0000255|PROSITE-ProRule:PRU00159"
FT REGION 80..121
FT /note="Disordered"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT COMPBIAS 88..106
FT /note="Polar residues"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT CARBOHYD 14
FT /note="N-linked (GlcNAc...) asparagine"
FT /evidence="ECO:0000255"
FT CARBOHYD 142
FT /note="N-linked (GlcNAc...) asparagine"
FT /evidence="ECO:0000255"
SQ SEQUENCE 499 AA; 55231 MW; 543AD871F839B886 CRC64;
MSNNWKSVRL RLQNRTLVFL LVILSFGSCY SLKSQGDGFL ESVTKDLWSD IDAEDLRAVG
FHRKLLGRFR NPYTHLNAFR DRPVARATPP SSSVSTRPDA KRSSTLPPPQ KSPPAQHVSA
PPPFVHHVTL PSLTSSSKTS SNSTIPIVAG CIAGAVFILL LATGVFFFKS KAGKSVNPWR
TGLSGQLQKV FITGVPKLKR SEIEAACEDF SNVIGSCPIG TLFKGTLSSG VEIAVASVAT
ASAKEWTNNI EMQFRKKIEM LSKINHKNFV NLLGYCEEEE PFTRILVFEY ASNGTVFEHL
HYKESEHLDW VMRLRIAMGI AYCLDHMHGL KPPIVHSNLL SSSVQLTEDY AVKIADFNFG
YLKGPSETES STNALIDTNI SETTQEDNVH SFGLLLFELM TGKLPESVQK GDSIDTGLAV
FLRGKTLREM VDPTIESFDE KIENIGEVIK SCIRADAKQR PIMKEVTGRL REITGLSPDD
TIPKLSPLWW AELEVLSTA
