Y3567_ARATH
ID Y3567_ARATH Reviewed; 441 AA.
AC Q8RX01; Q0WNA3; Q8LFC6;
DT 31-MAY-2011, integrated into UniProtKB/Swiss-Prot.
DT 01-JUN-2002, sequence version 1.
DT 03-AUG-2022, entry version 111.
DE RecName: Full=BTB/POZ domain-containing protein At3g05675;
GN OrderedLocusNames=At3g05675; ORFNames=F18C1;
OS Arabidopsis thaliana (Mouse-ear cress).
OC Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
OC Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae;
OC rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis.
OX NCBI_TaxID=3702;
RN [1]
RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC STRAIN=cv. Columbia;
RX PubMed=11130713; DOI=10.1038/35048706;
RA Salanoubat M., Lemcke K., Rieger M., Ansorge W., Unseld M., Fartmann B.,
RA Valle G., Bloecker H., Perez-Alonso M., Obermaier B., Delseny M.,
RA Boutry M., Grivell L.A., Mache R., Puigdomenech P., De Simone V.,
RA Choisne N., Artiguenave F., Robert C., Brottier P., Wincker P.,
RA Cattolico L., Weissenbach J., Saurin W., Quetier F., Schaefer M.,
RA Mueller-Auer S., Gabel C., Fuchs M., Benes V., Wurmbach E., Drzonek H.,
RA Erfle H., Jordan N., Bangert S., Wiedelmann R., Kranz H., Voss H.,
RA Holland R., Brandt P., Nyakatura G., Vezzi A., D'Angelo M., Pallavicini A.,
RA Toppo S., Simionati B., Conrad A., Hornischer K., Kauer G., Loehnert T.-H.,
RA Nordsiek G., Reichelt J., Scharfe M., Schoen O., Bargues M., Terol J.,
RA Climent J., Navarro P., Collado C., Perez-Perez A., Ottenwaelder B.,
RA Duchemin D., Cooke R., Laudie M., Berger-Llauro C., Purnelle B., Masuy D.,
RA de Haan M., Maarse A.C., Alcaraz J.-P., Cottet A., Casacuberta E.,
RA Monfort A., Argiriou A., Flores M., Liguori R., Vitale D., Mannhaupt G.,
RA Haase D., Schoof H., Rudd S., Zaccaria P., Mewes H.-W., Mayer K.F.X.,
RA Kaul S., Town C.D., Koo H.L., Tallon L.J., Jenkins J., Rooney T., Rizzo M.,
RA Walts A., Utterback T., Fujii C.Y., Shea T.P., Creasy T.H., Haas B.,
RA Maiti R., Wu D., Peterson J., Van Aken S., Pai G., Militscher J.,
RA Sellers P., Gill J.E., Feldblyum T.V., Preuss D., Lin X., Nierman W.C.,
RA Salzberg S.L., White O., Venter J.C., Fraser C.M., Kaneko T., Nakamura Y.,
RA Sato S., Kato T., Asamizu E., Sasamoto S., Kimura T., Idesawa K.,
RA Kawashima K., Kishida Y., Kiyokawa C., Kohara M., Matsumoto M., Matsuno A.,
RA Muraki A., Nakayama S., Nakazaki N., Shinpo S., Takeuchi C., Wada T.,
RA Watanabe A., Yamada M., Yasuda M., Tabata S.;
RT "Sequence and analysis of chromosome 3 of the plant Arabidopsis thaliana.";
RL Nature 408:820-822(2000).
RN [2]
RP GENOME REANNOTATION.
RC STRAIN=cv. Columbia;
RX PubMed=27862469; DOI=10.1111/tpj.13415;
RA Cheng C.Y., Krishnakumar V., Chan A.P., Thibaud-Nissen F., Schobel S.,
RA Town C.D.;
RT "Araport11: a complete reannotation of the Arabidopsis thaliana reference
RT genome.";
RL Plant J. 89:789-804(2017).
RN [3]
RP NUCLEOTIDE SEQUENCE [LARGE SCALE MRNA].
RC STRAIN=cv. Columbia;
RX PubMed=14593172; DOI=10.1126/science.1088305;
RA Yamada K., Lim J., Dale J.M., Chen H., Shinn P., Palm C.J., Southwick A.M.,
RA Wu H.C., Kim C.J., Nguyen M., Pham P.K., Cheuk R.F., Karlin-Newmann G.,
RA Liu S.X., Lam B., Sakano H., Wu T., Yu G., Miranda M., Quach H.L.,
RA Tripp M., Chang C.H., Lee J.M., Toriumi M.J., Chan M.M., Tang C.C.,
RA Onodera C.S., Deng J.M., Akiyama K., Ansari Y., Arakawa T., Banh J.,
RA Banno F., Bowser L., Brooks S.Y., Carninci P., Chao Q., Choy N., Enju A.,
RA Goldsmith A.D., Gurjal M., Hansen N.F., Hayashizaki Y., Johnson-Hopson C.,
RA Hsuan V.W., Iida K., Karnes M., Khan S., Koesema E., Ishida J., Jiang P.X.,
RA Jones T., Kawai J., Kamiya A., Meyers C., Nakajima M., Narusaka M.,
RA Seki M., Sakurai T., Satou M., Tamse R., Vaysberg M., Wallender E.K.,
RA Wong C., Yamamura Y., Yuan S., Shinozaki K., Davis R.W., Theologis A.,
RA Ecker J.R.;
RT "Empirical analysis of transcriptional activity in the Arabidopsis
RT genome.";
RL Science 302:842-846(2003).
RN [4]
RP NUCLEOTIDE SEQUENCE [LARGE SCALE MRNA].
RA Brover V.V., Troukhan M.E., Alexandrov N.A., Lu Y.-P., Flavell R.B.,
RA Feldmann K.A.;
RT "Full-length cDNA from Arabidopsis thaliana.";
RL Submitted (MAR-2002) to the EMBL/GenBank/DDBJ databases.
RN [5]
RP NUCLEOTIDE SEQUENCE [LARGE SCALE MRNA] OF 1-409.
RC STRAIN=cv. Columbia;
RA Totoki Y., Seki M., Ishida J., Nakajima M., Enju A., Kamiya A.,
RA Narusaka M., Shin-i T., Nakagawa M., Sakamoto N., Oishi K., Kohara Y.,
RA Kobayashi M., Toyoda A., Sakaki Y., Sakurai T., Iida K., Akiyama K.,
RA Satou M., Toyoda T., Konagaya A., Carninci P., Kawai J., Hayashizaki Y.,
RA Shinozaki K.;
RT "Large-scale analysis of RIKEN Arabidopsis full-length (RAFL) cDNAs.";
RL Submitted (JUL-2006) to the EMBL/GenBank/DDBJ databases.
RN [6]
RP DOMAIN BTB.
RX PubMed=15749712; DOI=10.1074/jbc.m413247200;
RA Gingerich D.J., Gagne J.M., Salter D.W., Hellmann H., Estelle M., Ma L.,
RA Vierstra R.D.;
RT "Cullins 3a and 3b assemble with members of the broad
RT complex/tramtrack/bric-a-brac (BTB) protein family to form essential
RT ubiquitin-protein ligases (E3s) in Arabidopsis.";
RL J. Biol. Chem. 280:18810-18821(2005).
CC -!- FUNCTION: May act as a substrate-specific adapter of an E3 ubiquitin-
CC protein ligase complex (CUL3-RBX1-BTB) which mediates the
CC ubiquitination and subsequent proteasomal degradation of target
CC proteins. {ECO:0000250}.
CC -!- PATHWAY: Protein modification; protein ubiquitination.
CC -!- DOMAIN: The BTB/POZ domain mediates the interaction with some component
CC of ubiquitin ligase complexes. {ECO:0000269|PubMed:15749712}.
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DR EMBL; AC011620; -; NOT_ANNOTATED_CDS; Genomic_DNA.
DR EMBL; CP002686; AEE74275.1; -; Genomic_DNA.
DR EMBL; CP002686; AEE74276.1; -; Genomic_DNA.
DR EMBL; CP002686; ANM63417.1; -; Genomic_DNA.
DR EMBL; AY091003; AAM14025.1; -; mRNA.
DR EMBL; AY084926; AAM61488.1; -; mRNA.
DR EMBL; AK229544; BAF01397.1; -; mRNA.
DR RefSeq; NP_001325506.1; NM_001337598.1.
DR RefSeq; NP_566255.1; NM_111441.3.
DR RefSeq; NP_850518.1; NM_180187.2.
DR AlphaFoldDB; Q8RX01; -.
DR SMR; Q8RX01; -.
DR PaxDb; Q8RX01; -.
DR PRIDE; Q8RX01; -.
DR ProteomicsDB; 243103; -.
DR EnsemblPlants; AT3G05675.1; AT3G05675.1; AT3G05675.
DR EnsemblPlants; AT3G05675.2; AT3G05675.2; AT3G05675.
DR EnsemblPlants; AT3G05675.3; AT3G05675.3; AT3G05675.
DR GeneID; 819735; -.
DR Gramene; AT3G05675.1; AT3G05675.1; AT3G05675.
DR Gramene; AT3G05675.2; AT3G05675.2; AT3G05675.
DR Gramene; AT3G05675.3; AT3G05675.3; AT3G05675.
DR KEGG; ath:AT3G05675; -.
DR Araport; AT3G05675; -.
DR TAIR; locus:505006330; AT3G05675.
DR eggNOG; ENOG502QSA0; Eukaryota.
DR HOGENOM; CLU_025834_2_0_1; -.
DR InParanoid; Q8RX01; -.
DR OMA; WLYCHSA; -.
DR OrthoDB; 989171at2759; -.
DR PhylomeDB; Q8RX01; -.
DR UniPathway; UPA00143; -.
DR PRO; PR:Q8RX01; -.
DR Proteomes; UP000006548; Chromosome 3.
DR ExpressionAtlas; Q8RX01; baseline and differential.
DR Genevisible; Q8RX01; AT.
DR GO; GO:0016567; P:protein ubiquitination; IEA:UniProtKB-UniPathway.
DR Gene3D; 3.30.710.10; -; 1.
DR InterPro; IPR000210; BTB/POZ_dom.
DR InterPro; IPR038920; BTB/POZ_dom_prot.
DR InterPro; IPR011333; SKP1/BTB/POZ_sf.
DR PANTHER; PTHR31060; PTHR31060; 1.
DR Pfam; PF00651; BTB; 1.
DR SUPFAM; SSF54695; SSF54695; 1.
DR PROSITE; PS50097; BTB; 1.
PE 2: Evidence at transcript level;
KW Reference proteome; Ubl conjugation pathway.
FT CHAIN 1..441
FT /note="BTB/POZ domain-containing protein At3g05675"
FT /id="PRO_0000408529"
FT DOMAIN 20..98
FT /note="BTB"
FT /evidence="ECO:0000255|PROSITE-ProRule:PRU00037"
FT CONFLICT 148
FT /note="V -> I (in Ref. 4; AAM61488)"
FT /evidence="ECO:0000305"
SQ SEQUENCE 441 AA; 50268 MW; FD6C523CB9098FA0 CRC64;
MEPRDNQAEA SYTFGDRSSS DIVVRLRNEE GRDDWIYCHS KILSEKSQYF ADRLSDKWPT
CKILDSRYCV EVICQESDYD HHINLLRLLY VVSDDVHEDN LCHNVKSALG ILSVAKELSC
PQIVTACVNY LEAVPWEEGE EEEILRIVPR IGSEAEPILA RLQPVDQSAV LEIFVSAFRF
ATSSPPLLLG DIKSSAQEQI EYMITEDDDA PLLIADEEVK LEVKQCVKSL FVRFFQCLEE
ITLKPVESEV INKKGSFRMV LSDMCWVFQI LTKMEVVRDF VITWADISEK LVKVVEQLET
TVVEAVEIRV KVIEVTAKVI EAIGYGTVIL PTAKRLQMVK LWLPFVRNTK PLVDSPVRED
EENDTVRYKI DGEIWQALES SFVSIILALP SADQAEILTE WLSKNGLYPD LTEAFEVWCY
RSKVAKRRLG LVGGEEENGM S
