Y3720_ARATH
ID Y3720_ARATH Reviewed; 476 AA.
AC Q9SD53; Q56YU5;
DT 11-SEP-2007, integrated into UniProtKB/Swiss-Prot.
DT 01-MAY-2000, sequence version 1.
DT 25-MAY-2022, entry version 97.
DE RecName: Full=UPF0481 protein At3g47200;
GN OrderedLocusNames=At3g47200; ORFNames=F13I12.250;
OS Arabidopsis thaliana (Mouse-ear cress).
OC Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
OC Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae;
OC rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis.
OX NCBI_TaxID=3702;
RN [1]
RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC STRAIN=cv. Columbia;
RX PubMed=11130713; DOI=10.1038/35048706;
RA Salanoubat M., Lemcke K., Rieger M., Ansorge W., Unseld M., Fartmann B.,
RA Valle G., Bloecker H., Perez-Alonso M., Obermaier B., Delseny M.,
RA Boutry M., Grivell L.A., Mache R., Puigdomenech P., De Simone V.,
RA Choisne N., Artiguenave F., Robert C., Brottier P., Wincker P.,
RA Cattolico L., Weissenbach J., Saurin W., Quetier F., Schaefer M.,
RA Mueller-Auer S., Gabel C., Fuchs M., Benes V., Wurmbach E., Drzonek H.,
RA Erfle H., Jordan N., Bangert S., Wiedelmann R., Kranz H., Voss H.,
RA Holland R., Brandt P., Nyakatura G., Vezzi A., D'Angelo M., Pallavicini A.,
RA Toppo S., Simionati B., Conrad A., Hornischer K., Kauer G., Loehnert T.-H.,
RA Nordsiek G., Reichelt J., Scharfe M., Schoen O., Bargues M., Terol J.,
RA Climent J., Navarro P., Collado C., Perez-Perez A., Ottenwaelder B.,
RA Duchemin D., Cooke R., Laudie M., Berger-Llauro C., Purnelle B., Masuy D.,
RA de Haan M., Maarse A.C., Alcaraz J.-P., Cottet A., Casacuberta E.,
RA Monfort A., Argiriou A., Flores M., Liguori R., Vitale D., Mannhaupt G.,
RA Haase D., Schoof H., Rudd S., Zaccaria P., Mewes H.-W., Mayer K.F.X.,
RA Kaul S., Town C.D., Koo H.L., Tallon L.J., Jenkins J., Rooney T., Rizzo M.,
RA Walts A., Utterback T., Fujii C.Y., Shea T.P., Creasy T.H., Haas B.,
RA Maiti R., Wu D., Peterson J., Van Aken S., Pai G., Militscher J.,
RA Sellers P., Gill J.E., Feldblyum T.V., Preuss D., Lin X., Nierman W.C.,
RA Salzberg S.L., White O., Venter J.C., Fraser C.M., Kaneko T., Nakamura Y.,
RA Sato S., Kato T., Asamizu E., Sasamoto S., Kimura T., Idesawa K.,
RA Kawashima K., Kishida Y., Kiyokawa C., Kohara M., Matsumoto M., Matsuno A.,
RA Muraki A., Nakayama S., Nakazaki N., Shinpo S., Takeuchi C., Wada T.,
RA Watanabe A., Yamada M., Yasuda M., Tabata S.;
RT "Sequence and analysis of chromosome 3 of the plant Arabidopsis thaliana.";
RL Nature 408:820-822(2000).
RN [2]
RP GENOME REANNOTATION.
RC STRAIN=cv. Columbia;
RX PubMed=27862469; DOI=10.1111/tpj.13415;
RA Cheng C.Y., Krishnakumar V., Chan A.P., Thibaud-Nissen F., Schobel S.,
RA Town C.D.;
RT "Araport11: a complete reannotation of the Arabidopsis thaliana reference
RT genome.";
RL Plant J. 89:789-804(2017).
RN [3]
RP NUCLEOTIDE SEQUENCE [LARGE SCALE MRNA].
RC STRAIN=cv. Columbia;
RA Totoki Y., Seki M., Ishida J., Nakajima M., Enju A., Kamiya A.,
RA Narusaka M., Shin-i T., Nakagawa M., Sakamoto N., Oishi K., Kohara Y.,
RA Kobayashi M., Toyoda A., Sakaki Y., Sakurai T., Iida K., Akiyama K.,
RA Satou M., Toyoda T., Konagaya A., Carninci P., Kawai J., Hayashizaki Y.,
RA Shinozaki K.;
RT "Large-scale analysis of RIKEN Arabidopsis full-length (RAFL) cDNAs.";
RL Submitted (SEP-2004) to the EMBL/GenBank/DDBJ databases.
CC -!- SUBCELLULAR LOCATION: Membrane {ECO:0000255}; Multi-pass membrane
CC protein {ECO:0000255}.
CC -!- SIMILARITY: Belongs to the UPF0481 family. {ECO:0000305}.
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DR EMBL; AL133292; CAB61966.1; -; Genomic_DNA.
DR EMBL; CP002686; AEE78254.1; -; Genomic_DNA.
DR EMBL; CP002686; AEE78255.1; -; Genomic_DNA.
DR EMBL; AK176252; BAD44015.1; -; mRNA.
DR EMBL; AK221225; BAD93809.1; -; mRNA.
DR PIR; T45656; T45656.
DR RefSeq; NP_001030825.1; NM_001035748.2.
DR RefSeq; NP_190304.1; NM_114587.2.
DR AlphaFoldDB; Q9SD53; -.
DR BioGRID; 9193; 3.
DR STRING; 3702.AT3G47200.2; -.
DR SwissPalm; Q9SD53; -.
DR PaxDb; Q9SD53; -.
DR PRIDE; Q9SD53; -.
DR ProteomicsDB; 228610; -.
DR EnsemblPlants; AT3G47200.1; AT3G47200.1; AT3G47200.
DR EnsemblPlants; AT3G47200.2; AT3G47200.2; AT3G47200.
DR GeneID; 823873; -.
DR Gramene; AT3G47200.1; AT3G47200.1; AT3G47200.
DR Gramene; AT3G47200.2; AT3G47200.2; AT3G47200.
DR KEGG; ath:AT3G47200; -.
DR Araport; AT3G47200; -.
DR TAIR; locus:2075671; AT3G47200.
DR eggNOG; ENOG502QQDR; Eukaryota.
DR HOGENOM; CLU_020188_0_2_1; -.
DR InParanoid; Q9SD53; -.
DR OMA; PANCESF; -.
DR OrthoDB; 763626at2759; -.
DR PhylomeDB; Q9SD53; -.
DR PRO; PR:Q9SD53; -.
DR Proteomes; UP000006548; Chromosome 3.
DR ExpressionAtlas; Q9SD53; baseline and differential.
DR GO; GO:0016021; C:integral component of membrane; IEA:UniProtKB-KW.
DR GO; GO:0005886; C:plasma membrane; HDA:TAIR.
DR InterPro; IPR004158; DUF247_pln.
DR PANTHER; PTHR31549; PTHR31549; 1.
DR Pfam; PF03140; DUF247; 1.
PE 2: Evidence at transcript level;
KW Membrane; Reference proteome; Transmembrane; Transmembrane helix.
FT CHAIN 1..476
FT /note="UPF0481 protein At3g47200"
FT /id="PRO_0000300099"
FT TRANSMEM 133..153
FT /note="Helical"
FT /evidence="ECO:0000255"
FT TRANSMEM 439..459
FT /note="Helical"
FT /evidence="ECO:0000255"
FT REGION 1..24
FT /note="Disordered"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT CONFLICT 220
FT /note="S -> G (in Ref. 3; BAD93809)"
FT /evidence="ECO:0000305"
SQ SEQUENCE 476 AA; 54119 MW; 9E87D130987B30DC CRC64;
MADKTDIISS SSDKASPPPP SAFRNYLSSG SKEPVLLLES AGKESCCIFR VPESFVALNP
KAYKPKVVSI GPYHYGEKHL QMIQQHKPRL LQLFLDEAKK KDVEENVLVK AVVDLEDKIR
KSYSEELKTG HDLMFMMVLD GCFILMVFLI MSGNIELSED PIFSIPWLLS SIQSDLLLLE
NQVPFFVLQT LYVGSKIGVS SDLNRIAFHF FKNPIDKEGS YWEKHRNYKA KHLLDLIRET
FLPNTSESDK ASSPHVQVQL HEGKSGNVPS VDSKAVPLIL SAKRLRLQGI KFRLRRSKED
SILNVRLKKN KLQIPQLRFD GFISSFFLNC VAFEQFYTDS SNEITTYIVF MGCLLNNEED
VTFLRNDKLI IENHFGSNNE VSEFFKTISK DVVFEVDTSY LNNVFKGVNE YTKKWYNGLW
AGFRHTHFES PWTFLSSCAV LFVILLTMLQ STVAILSYLN DKKGNGNAAP PPLGLP
