Y3852_ARATH
ID Y3852_ARATH Reviewed; 120 AA.
AC Q9LH88;
DT 21-SEP-2011, integrated into UniProtKB/Swiss-Prot.
DT 01-OCT-2000, sequence version 1.
DT 03-AUG-2022, entry version 81.
DE RecName: Full=Putative B3 domain-containing protein At3g28853;
GN OrderedLocusNames=At3g28853; ORFNames=T19N8.16;
OS Arabidopsis thaliana (Mouse-ear cress).
OC Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
OC Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae;
OC rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis.
OX NCBI_TaxID=3702;
RN [1]
RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC STRAIN=cv. Columbia;
RX PubMed=10907853; DOI=10.1093/dnares/7.3.217;
RA Kaneko T., Katoh T., Sato S., Nakamura Y., Asamizu E., Tabata S.;
RT "Structural analysis of Arabidopsis thaliana chromosome 3. II. Sequence
RT features of the 4,251,695 bp regions covered by 90 P1, TAC and BAC
RT clones.";
RL DNA Res. 7:217-221(2000).
RN [2]
RP GENOME REANNOTATION.
RC STRAIN=cv. Columbia;
RX PubMed=27862469; DOI=10.1111/tpj.13415;
RA Cheng C.Y., Krishnakumar V., Chan A.P., Thibaud-Nissen F., Schobel S.,
RA Town C.D.;
RT "Araport11: a complete reannotation of the Arabidopsis thaliana reference
RT genome.";
RL Plant J. 89:789-804(2017).
RN [3]
RP GENE FAMILY.
RX PubMed=18986826; DOI=10.1016/j.tplants.2008.09.006;
RA Swaminathan K., Peterson K., Jack T.;
RT "The plant B3 superfamily.";
RL Trends Plant Sci. 13:647-655(2008).
CC -!- SUBCELLULAR LOCATION: Nucleus {ECO:0000255|PROSITE-ProRule:PRU00326}.
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DR EMBL; AP002057; BAB03184.1; -; Genomic_DNA.
DR EMBL; CP002686; ANM64405.1; -; Genomic_DNA.
DR RefSeq; NP_001326435.1; NM_001338972.1.
DR AlphaFoldDB; Q9LH88; -.
DR SMR; Q9LH88; -.
DR PRIDE; Q9LH88; -.
DR EnsemblPlants; AT3G28853.1; AT3G28853.1; AT3G28853.
DR GeneID; 28719334; -.
DR Gramene; AT3G28853.1; AT3G28853.1; AT3G28853.
DR KEGG; ath:AT3G28853; -.
DR Araport; AT3G28853; -.
DR InParanoid; Q9LH88; -.
DR OrthoDB; 701908at2759; -.
DR PRO; PR:Q9LH88; -.
DR Proteomes; UP000006548; Chromosome 3.
DR ExpressionAtlas; Q9LH88; baseline and differential.
DR GO; GO:0005634; C:nucleus; IEA:UniProtKB-SubCell.
DR GO; GO:0003677; F:DNA binding; IEA:UniProtKB-KW.
DR CDD; cd10017; B3_DNA; 1.
DR Gene3D; 2.40.330.10; -; 1.
DR InterPro; IPR003340; B3_DNA-bd.
DR InterPro; IPR015300; DNA-bd_pseudobarrel_sf.
DR Pfam; PF02362; B3; 1.
DR SMART; SM01019; B3; 1.
DR SUPFAM; SSF101936; SSF101936; 1.
DR PROSITE; PS50863; B3; 1.
PE 3: Inferred from homology;
KW DNA-binding; Nucleus; Reference proteome; Transcription;
KW Transcription regulation.
FT CHAIN 1..120
FT /note="Putative B3 domain-containing protein At3g28853"
FT /id="PRO_0000412855"
FT DNA_BIND 19..120
FT /note="TF-B3"
FT /evidence="ECO:0000255|PROSITE-ProRule:PRU00326"
SQ SEQUENCE 120 AA; 14459 MW; 3B2D7FFBA8A62B4B CRC64;
MADNIDLELS LQTNHSMIIN KRLTQSDVDY NNRLHLPKRE FEQFILPEME WELVMNLRNS
VEVIVKDVNG NEYHVTLVKY QNGHYYFMGK WMDIVRAKGY KRDDEISLLW DKSNEVFYII