Y3905_ARATH
ID Y3905_ARATH Reviewed; 480 AA.
AC Q5XVA8; Q5XVA9; Q9SMU3;
DT 26-FEB-2008, integrated into UniProtKB/Swiss-Prot.
DT 23-NOV-2004, sequence version 1.
DT 03-AUG-2022, entry version 87.
DE RecName: Full=Uncharacterized protein At3g49055;
GN OrderedLocusNames=At3g49055; ORFNames=T2J13.1;
OS Arabidopsis thaliana (Mouse-ear cress).
OC Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
OC Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae;
OC rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis.
OX NCBI_TaxID=3702;
RN [1]
RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC STRAIN=cv. Columbia;
RX PubMed=11130713; DOI=10.1038/35048706;
RA Salanoubat M., Lemcke K., Rieger M., Ansorge W., Unseld M., Fartmann B.,
RA Valle G., Bloecker H., Perez-Alonso M., Obermaier B., Delseny M.,
RA Boutry M., Grivell L.A., Mache R., Puigdomenech P., De Simone V.,
RA Choisne N., Artiguenave F., Robert C., Brottier P., Wincker P.,
RA Cattolico L., Weissenbach J., Saurin W., Quetier F., Schaefer M.,
RA Mueller-Auer S., Gabel C., Fuchs M., Benes V., Wurmbach E., Drzonek H.,
RA Erfle H., Jordan N., Bangert S., Wiedelmann R., Kranz H., Voss H.,
RA Holland R., Brandt P., Nyakatura G., Vezzi A., D'Angelo M., Pallavicini A.,
RA Toppo S., Simionati B., Conrad A., Hornischer K., Kauer G., Loehnert T.-H.,
RA Nordsiek G., Reichelt J., Scharfe M., Schoen O., Bargues M., Terol J.,
RA Climent J., Navarro P., Collado C., Perez-Perez A., Ottenwaelder B.,
RA Duchemin D., Cooke R., Laudie M., Berger-Llauro C., Purnelle B., Masuy D.,
RA de Haan M., Maarse A.C., Alcaraz J.-P., Cottet A., Casacuberta E.,
RA Monfort A., Argiriou A., Flores M., Liguori R., Vitale D., Mannhaupt G.,
RA Haase D., Schoof H., Rudd S., Zaccaria P., Mewes H.-W., Mayer K.F.X.,
RA Kaul S., Town C.D., Koo H.L., Tallon L.J., Jenkins J., Rooney T., Rizzo M.,
RA Walts A., Utterback T., Fujii C.Y., Shea T.P., Creasy T.H., Haas B.,
RA Maiti R., Wu D., Peterson J., Van Aken S., Pai G., Militscher J.,
RA Sellers P., Gill J.E., Feldblyum T.V., Preuss D., Lin X., Nierman W.C.,
RA Salzberg S.L., White O., Venter J.C., Fraser C.M., Kaneko T., Nakamura Y.,
RA Sato S., Kato T., Asamizu E., Sasamoto S., Kimura T., Idesawa K.,
RA Kawashima K., Kishida Y., Kiyokawa C., Kohara M., Matsumoto M., Matsuno A.,
RA Muraki A., Nakayama S., Nakazaki N., Shinpo S., Takeuchi C., Wada T.,
RA Watanabe A., Yamada M., Yasuda M., Tabata S.;
RT "Sequence and analysis of chromosome 3 of the plant Arabidopsis thaliana.";
RL Nature 408:820-822(2000).
RN [2]
RP GENOME REANNOTATION.
RC STRAIN=cv. Columbia;
RX PubMed=27862469; DOI=10.1111/tpj.13415;
RA Cheng C.Y., Krishnakumar V., Chan A.P., Thibaud-Nissen F., Schobel S.,
RA Town C.D.;
RT "Araport11: a complete reannotation of the Arabidopsis thaliana reference
RT genome.";
RL Plant J. 89:789-804(2017).
RN [3]
RP NUCLEOTIDE SEQUENCE [LARGE SCALE MRNA] (ISOFORMS 1 AND 2).
RC STRAIN=cv. Columbia;
RA Underwood B.A., Xiao Y.-L., Moskal W.A. Jr., Monaghan E.L., Wang W.,
RA Redman J.C., Wu H.C., Utterback T., Town C.D.;
RL Submitted (FEB-2005) to the EMBL/GenBank/DDBJ databases.
CC -!- ALTERNATIVE PRODUCTS:
CC Event=Alternative splicing; Named isoforms=2;
CC Name=1;
CC IsoId=Q5XVA8-1; Sequence=Displayed;
CC Name=2;
CC IsoId=Q5XVA8-2; Sequence=VSP_031879, VSP_031880;
CC -!- MISCELLANEOUS: [Isoform 2]: May be due to intron retention.
CC {ECO:0000305}.
CC -!- SEQUENCE CAUTION:
CC Sequence=CAB62004.1; Type=Erroneous gene model prediction; Note=The predicted gene At3g49060 has been split into 2 genes: At3g49055 and At3g49060.; Evidence={ECO:0000305};
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DR EMBL; AL132967; CAB62004.1; ALT_SEQ; Genomic_DNA.
DR EMBL; CP002686; AEE78493.1; -; Genomic_DNA.
DR EMBL; AY735614; AAU44484.1; -; mRNA.
DR EMBL; AY924788; AAX23863.1; -; mRNA.
DR EMBL; AY735613; AAU44483.1; -; mRNA.
DR PIR; T46124; T46124.
DR RefSeq; NP_680119.1; NM_148866.2. [Q5XVA8-1]
DR AlphaFoldDB; Q5XVA8; -.
DR SMR; Q5XVA8; -.
DR iPTMnet; Q5XVA8; -.
DR PaxDb; Q5XVA8; -.
DR PRIDE; Q5XVA8; -.
DR ProteomicsDB; 242889; -. [Q5XVA8-1]
DR EnsemblPlants; AT3G49055.1; AT3G49055.1; AT3G49055. [Q5XVA8-1]
DR GeneID; 824067; -.
DR Gramene; AT3G49055.1; AT3G49055.1; AT3G49055. [Q5XVA8-1]
DR KEGG; ath:AT3G49055; -.
DR Araport; AT3G49055; -.
DR TAIR; locus:504955632; AT3G49055.
DR eggNOG; ENOG502QUP5; Eukaryota.
DR HOGENOM; CLU_032437_0_0_1; -.
DR InParanoid; Q5XVA8; -.
DR OMA; TRYACWP; -.
DR PhylomeDB; Q5XVA8; -.
DR PRO; PR:Q5XVA8; -.
DR Proteomes; UP000006548; Chromosome 3.
DR ExpressionAtlas; Q5XVA8; baseline and differential.
DR InterPro; IPR040300; At3g49055-like.
DR PANTHER; PTHR34937; PTHR34937; 1.
PE 2: Evidence at transcript level;
KW Alternative splicing; Reference proteome.
FT CHAIN 1..480
FT /note="Uncharacterized protein At3g49055"
FT /id="PRO_0000322136"
FT REGION 1..20
FT /note="Disordered"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT VAR_SEQ 328..356
FT /note="EELVKAIREAESEVSRWREACELEVEAGQ -> MYFWINSFCLPLYVSQFCH
FT KSLTRERLLY (in isoform 2)"
FT /evidence="ECO:0000303|Ref.3"
FT /id="VSP_031879"
FT VAR_SEQ 357..480
FT /note="Missing (in isoform 2)"
FT /evidence="ECO:0000303|Ref.3"
FT /id="VSP_031880"
SQ SEQUENCE 480 AA; 55492 MW; 5AA03B13F72EAEAF CRC64;
MDVKDTGINR SDTPISDQDH DFRQWNHSSL DSNFLSLRSQ IFEASYRRTD LIRVNHELFH
ERDALRRRNS ELEAGILEEV MIREEMKRDL EVSKETVSEL EGEAKEKTKL LSDIADYVRS
MEDRLSKLIR CLNEENVPEE ERGRKLETKE YNSKSILELV KEVVTKLETF QESTKKKKME
LSRSVEFLEE ENRDINVLLR AALFEKQTAE KQLKEMNDQK GLALLQIAGR GLQRIGFGFG
LGESVEESSE TGNIANEEEE NGVVIAIEKT MKKLRQEVSQ LKISLEESRL EEVGLRKVTE
EQAQKLAENT VYINKLQNQE KFLAQNVEEL VKAIREAESE VSRWREACEL EVEAGQREVE
VRDQLIAVLK SEVEKLRSAL ARSEGKLKLK EELAKAAMVA EEAAEKSLRL AERRIAQLLS
RIEHLYRQLE EAESTERRRG KFRYVWCWPM WRFPTAASTA ATATGSSSYT SNRALLRYDA
