Y3918_ARATH
ID Y3918_ARATH Reviewed; 277 AA.
AC Q1G3M3; Q9LJL1;
DT 26-MAY-2009, integrated into UniProtKB/Swiss-Prot.
DT 27-JUN-2006, sequence version 1.
DT 25-MAY-2022, entry version 85.
DE RecName: Full=B3 domain-containing protein At3g19184;
GN OrderedLocusNames=At3g19184; ORFNames=MVI11;
OS Arabidopsis thaliana (Mouse-ear cress).
OC Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
OC Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae;
OC rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis.
OX NCBI_TaxID=3702;
RN [1]
RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC STRAIN=cv. Columbia;
RX PubMed=10907853; DOI=10.1093/dnares/7.3.217;
RA Kaneko T., Katoh T., Sato S., Nakamura Y., Asamizu E., Tabata S.;
RT "Structural analysis of Arabidopsis thaliana chromosome 3. II. Sequence
RT features of the 4,251,695 bp regions covered by 90 P1, TAC and BAC
RT clones.";
RL DNA Res. 7:217-221(2000).
RN [2]
RP GENOME REANNOTATION.
RC STRAIN=cv. Columbia;
RX PubMed=27862469; DOI=10.1111/tpj.13415;
RA Cheng C.Y., Krishnakumar V., Chan A.P., Thibaud-Nissen F., Schobel S.,
RA Town C.D.;
RT "Araport11: a complete reannotation of the Arabidopsis thaliana reference
RT genome.";
RL Plant J. 89:789-804(2017).
RN [3]
RP NUCLEOTIDE SEQUENCE [LARGE SCALE MRNA].
RC STRAIN=cv. Columbia;
RX PubMed=17147637; DOI=10.1111/j.1467-7652.2006.00183.x;
RA Underwood B.A., Vanderhaeghen R., Whitford R., Town C.D., Hilson P.;
RT "Simultaneous high-throughput recombinational cloning of open reading
RT frames in closed and open configurations.";
RL Plant Biotechnol. J. 4:317-324(2006).
RN [4]
RP NUCLEOTIDE SEQUENCE [LARGE SCALE MRNA].
RA Fujita M., Mizukado S., Seki M., Shinozaki K., Mitsuda N., Takiguchi Y.,
RA Takagi M.;
RT "ORF cloning and analysis of Arabidopsis transcription factor genes.";
RL Submitted (MAR-2009) to the EMBL/GenBank/DDBJ databases.
RN [5]
RP GENE FAMILY.
RX PubMed=18986826; DOI=10.1016/j.tplants.2008.09.006;
RA Swaminathan K., Peterson K., Jack T.;
RT "The plant B3 superfamily.";
RL Trends Plant Sci. 13:647-655(2008).
CC -!- SUBCELLULAR LOCATION: Nucleus {ECO:0000255|PROSITE-ProRule:PRU00326}.
CC -!- SEQUENCE CAUTION:
CC Sequence=BAB02959.1; Type=Erroneous gene model prediction; Evidence={ECO:0000305};
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DR EMBL; AP000419; BAB02959.1; ALT_SEQ; Genomic_DNA.
DR EMBL; CP002686; AEE76205.1; -; Genomic_DNA.
DR EMBL; DQ487561; ABF59230.1; -; mRNA.
DR EMBL; AB493621; BAH30459.1; -; mRNA.
DR RefSeq; NP_001030726.2; NM_001035649.4.
DR AlphaFoldDB; Q1G3M3; -.
DR SMR; Q1G3M3; -.
DR BioGRID; 529114; 4.
DR IntAct; Q1G3M3; 4.
DR STRING; 3702.AT3G19184.1; -.
DR PaxDb; Q1G3M3; -.
DR ProteomicsDB; 242885; -.
DR EnsemblPlants; AT3G19184.1; AT3G19184.1; AT3G19184.
DR GeneID; 3768753; -.
DR Gramene; AT3G19184.1; AT3G19184.1; AT3G19184.
DR KEGG; ath:AT3G19184; -.
DR Araport; AT3G19184; -.
DR TAIR; locus:1009023252; AT3G19184.
DR eggNOG; ENOG502QW3X; Eukaryota.
DR HOGENOM; CLU_058918_1_0_1; -.
DR InParanoid; Q1G3M3; -.
DR OMA; LPKHDEY; -.
DR PhylomeDB; Q1G3M3; -.
DR PRO; PR:Q1G3M3; -.
DR Proteomes; UP000006548; Chromosome 3.
DR ExpressionAtlas; Q1G3M3; baseline and differential.
DR Genevisible; Q1G3M3; AT.
DR GO; GO:0005634; C:nucleus; IEA:UniProtKB-SubCell.
DR GO; GO:0003677; F:DNA binding; IEA:UniProtKB-KW.
DR CDD; cd10017; B3_DNA; 1.
DR Gene3D; 2.40.330.10; -; 1.
DR InterPro; IPR003340; B3_DNA-bd.
DR InterPro; IPR015300; DNA-bd_pseudobarrel_sf.
DR InterPro; IPR044837; REM16-like.
DR PANTHER; PTHR31391; PTHR31391; 1.
DR Pfam; PF02362; B3; 1.
DR SMART; SM01019; B3; 1.
DR SUPFAM; SSF101936; SSF101936; 1.
DR PROSITE; PS50863; B3; 1.
PE 2: Evidence at transcript level;
KW DNA-binding; Nucleus; Reference proteome; Transcription;
KW Transcription regulation.
FT CHAIN 1..277
FT /note="B3 domain-containing protein At3g19184"
FT /id="PRO_0000375144"
FT DNA_BIND 130..221
FT /note="TF-B3"
FT /evidence="ECO:0000255|PROSITE-ProRule:PRU00326"
FT REGION 33..94
FT /note="Disordered"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT REGION 224..277
FT /note="Disordered"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT COMPBIAS 33..50
FT /note="Polar residues"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT COMPBIAS 228..246
FT /note="Acidic residues"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT COMPBIAS 247..266
FT /note="Basic and acidic residues"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
SQ SEQUENCE 277 AA; 31647 MW; 893D14B463AE4F2D CRC64;
MVESELSYEQ IRLNRVEENK KRMGELNLNK LAQSLRVSSS SSSSSKPSPA KPRTMRIPVD
FSEVRRSSRA KGPPPSYKEF GLEPLERRPR RSSRRRDLLN RVYASDDARM YAFDRAEKLQ
SSLDSEYASF TKPMLQSHVT GGFWLGLPLP FCKAHMPKRD VIMTLVDEEE EESQAKYLAQ
KNGLSGGWRG FAIDHQLVDG DAVVFHLIAR TTFKVYIIRV NDDANNDSDG NEVNDDDSDG
NEEDRDNDNE SNEKQKETVS EGRQLRSSGK RKRRGRK