Y4104_MAGSA
ID Y4104_MAGSA Reviewed; 107 AA.
AC Q2VZR7;
DT 15-JAN-2008, integrated into UniProtKB/Swiss-Prot.
DT 10-JAN-2006, sequence version 1.
DT 25-MAY-2022, entry version 83.
DE RecName: Full=Nucleoid-associated protein amb4104 {ECO:0000255|HAMAP-Rule:MF_00274};
GN OrderedLocusNames=amb4104;
OS Magnetospirillum magneticum (strain AMB-1 / ATCC 700264).
OC Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales;
OC Rhodospirillaceae; Magnetospirillum.
OX NCBI_TaxID=342108;
RN [1]
RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC STRAIN=AMB-1 / ATCC 700264;
RX PubMed=16303747; DOI=10.1093/dnares/dsi002;
RA Matsunaga T., Okamura Y., Fukuda Y., Wahyudi A.T., Murase Y., Takeyama H.;
RT "Complete genome sequence of the facultative anaerobic magnetotactic
RT bacterium Magnetospirillum sp. strain AMB-1.";
RL DNA Res. 12:157-166(2005).
CC -!- FUNCTION: Binds to DNA and alters its conformation. May be involved in
CC regulation of gene expression, nucleoid organization and DNA
CC protection. {ECO:0000255|HAMAP-Rule:MF_00274}.
CC -!- SUBUNIT: Homodimer. {ECO:0000255|HAMAP-Rule:MF_00274}.
CC -!- SUBCELLULAR LOCATION: Cytoplasm, nucleoid {ECO:0000255|HAMAP-
CC Rule:MF_00274}.
CC -!- SIMILARITY: Belongs to the YbaB/EbfC family. {ECO:0000255|HAMAP-
CC Rule:MF_00274}.
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DR EMBL; AP007255; BAE52908.1; -; Genomic_DNA.
DR RefSeq; WP_011386454.1; NC_007626.1.
DR AlphaFoldDB; Q2VZR7; -.
DR SMR; Q2VZR7; -.
DR STRING; 342108.amb4104; -.
DR EnsemblBacteria; BAE52908; BAE52908; amb4104.
DR KEGG; mag:amb4104; -.
DR HOGENOM; CLU_140930_0_1_5; -.
DR OMA; MGNMMKQ; -.
DR OrthoDB; 1883809at2; -.
DR Proteomes; UP000007058; Chromosome.
DR GO; GO:0043590; C:bacterial nucleoid; IEA:UniProtKB-UniRule.
DR GO; GO:0005737; C:cytoplasm; IEA:UniProtKB-UniRule.
DR GO; GO:0003677; F:DNA binding; IEA:UniProtKB-UniRule.
DR Gene3D; 3.30.1310.10; -; 1.
DR HAMAP; MF_00274; DNA_YbaB_EbfC; 1.
DR InterPro; IPR036894; YbaB-like_sf.
DR InterPro; IPR004401; YbaB/EbfC.
DR PANTHER; PTHR33449; PTHR33449; 1.
DR Pfam; PF02575; YbaB_DNA_bd; 1.
DR PIRSF; PIRSF004555; UCP004555; 1.
DR SUPFAM; SSF82607; SSF82607; 1.
DR TIGRFAMs; TIGR00103; DNA_YbaB_EbfC; 1.
PE 3: Inferred from homology;
KW Cytoplasm; DNA-binding; Reference proteome.
FT CHAIN 1..107
FT /note="Nucleoid-associated protein amb4104"
FT /id="PRO_1000003767"
SQ SEQUENCE 107 AA; 11508 MW; 0ABC73EDF105A7D7 CRC64;
MKNLGNLMKQ AQQMQSKMAE MQATMAEMEV TGSSGAGMLQ VTLNGKYELK KVKIDPSLVD
PSDVEVLEDL ILAAFNDAKA KAEAAMAEEM AKMTGGLNLP PGFKLPF