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Y4104_MAGSA
ID   Y4104_MAGSA             Reviewed;         107 AA.
AC   Q2VZR7;
DT   15-JAN-2008, integrated into UniProtKB/Swiss-Prot.
DT   10-JAN-2006, sequence version 1.
DT   25-MAY-2022, entry version 83.
DE   RecName: Full=Nucleoid-associated protein amb4104 {ECO:0000255|HAMAP-Rule:MF_00274};
GN   OrderedLocusNames=amb4104;
OS   Magnetospirillum magneticum (strain AMB-1 / ATCC 700264).
OC   Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales;
OC   Rhodospirillaceae; Magnetospirillum.
OX   NCBI_TaxID=342108;
RN   [1]
RP   NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC   STRAIN=AMB-1 / ATCC 700264;
RX   PubMed=16303747; DOI=10.1093/dnares/dsi002;
RA   Matsunaga T., Okamura Y., Fukuda Y., Wahyudi A.T., Murase Y., Takeyama H.;
RT   "Complete genome sequence of the facultative anaerobic magnetotactic
RT   bacterium Magnetospirillum sp. strain AMB-1.";
RL   DNA Res. 12:157-166(2005).
CC   -!- FUNCTION: Binds to DNA and alters its conformation. May be involved in
CC       regulation of gene expression, nucleoid organization and DNA
CC       protection. {ECO:0000255|HAMAP-Rule:MF_00274}.
CC   -!- SUBUNIT: Homodimer. {ECO:0000255|HAMAP-Rule:MF_00274}.
CC   -!- SUBCELLULAR LOCATION: Cytoplasm, nucleoid {ECO:0000255|HAMAP-
CC       Rule:MF_00274}.
CC   -!- SIMILARITY: Belongs to the YbaB/EbfC family. {ECO:0000255|HAMAP-
CC       Rule:MF_00274}.
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DR   EMBL; AP007255; BAE52908.1; -; Genomic_DNA.
DR   RefSeq; WP_011386454.1; NC_007626.1.
DR   AlphaFoldDB; Q2VZR7; -.
DR   SMR; Q2VZR7; -.
DR   STRING; 342108.amb4104; -.
DR   EnsemblBacteria; BAE52908; BAE52908; amb4104.
DR   KEGG; mag:amb4104; -.
DR   HOGENOM; CLU_140930_0_1_5; -.
DR   OMA; MGNMMKQ; -.
DR   OrthoDB; 1883809at2; -.
DR   Proteomes; UP000007058; Chromosome.
DR   GO; GO:0043590; C:bacterial nucleoid; IEA:UniProtKB-UniRule.
DR   GO; GO:0005737; C:cytoplasm; IEA:UniProtKB-UniRule.
DR   GO; GO:0003677; F:DNA binding; IEA:UniProtKB-UniRule.
DR   Gene3D; 3.30.1310.10; -; 1.
DR   HAMAP; MF_00274; DNA_YbaB_EbfC; 1.
DR   InterPro; IPR036894; YbaB-like_sf.
DR   InterPro; IPR004401; YbaB/EbfC.
DR   PANTHER; PTHR33449; PTHR33449; 1.
DR   Pfam; PF02575; YbaB_DNA_bd; 1.
DR   PIRSF; PIRSF004555; UCP004555; 1.
DR   SUPFAM; SSF82607; SSF82607; 1.
DR   TIGRFAMs; TIGR00103; DNA_YbaB_EbfC; 1.
PE   3: Inferred from homology;
KW   Cytoplasm; DNA-binding; Reference proteome.
FT   CHAIN           1..107
FT                   /note="Nucleoid-associated protein amb4104"
FT                   /id="PRO_1000003767"
SQ   SEQUENCE   107 AA;  11508 MW;  0ABC73EDF105A7D7 CRC64;
     MKNLGNLMKQ AQQMQSKMAE MQATMAEMEV TGSSGAGMLQ VTLNGKYELK KVKIDPSLVD
     PSDVEVLEDL ILAAFNDAKA KAEAAMAEEM AKMTGGLNLP PGFKLPF
 
 
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