Y4116_ARATH
ID Y4116_ARATH Reviewed; 527 AA.
AC O04615; F4JHY9;
DT 05-APR-2011, integrated into UniProtKB/Swiss-Prot.
DT 01-JUL-1997, sequence version 1.
DT 03-AUG-2022, entry version 119.
DE RecName: Full=BTB/POZ domain-containing protein At4g01160;
GN OrderedLocusNames=At4g01160; ORFNames=A_IG002N01.11, F2N1.11;
OS Arabidopsis thaliana (Mouse-ear cress).
OC Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
OC Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae;
OC rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis.
OX NCBI_TaxID=3702;
RN [1]
RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC STRAIN=cv. Columbia;
RX PubMed=10617198; DOI=10.1038/47134;
RA Mayer K.F.X., Schueller C., Wambutt R., Murphy G., Volckaert G., Pohl T.,
RA Duesterhoeft A., Stiekema W., Entian K.-D., Terryn N., Harris B.,
RA Ansorge W., Brandt P., Grivell L.A., Rieger M., Weichselgartner M.,
RA de Simone V., Obermaier B., Mache R., Mueller M., Kreis M., Delseny M.,
RA Puigdomenech P., Watson M., Schmidtheini T., Reichert B., Portetelle D.,
RA Perez-Alonso M., Boutry M., Bancroft I., Vos P., Hoheisel J.,
RA Zimmermann W., Wedler H., Ridley P., Langham S.-A., McCullagh B.,
RA Bilham L., Robben J., van der Schueren J., Grymonprez B., Chuang Y.-J.,
RA Vandenbussche F., Braeken M., Weltjens I., Voet M., Bastiaens I., Aert R.,
RA Defoor E., Weitzenegger T., Bothe G., Ramsperger U., Hilbert H., Braun M.,
RA Holzer E., Brandt A., Peters S., van Staveren M., Dirkse W., Mooijman P.,
RA Klein Lankhorst R., Rose M., Hauf J., Koetter P., Berneiser S., Hempel S.,
RA Feldpausch M., Lamberth S., Van den Daele H., De Keyser A., Buysshaert C.,
RA Gielen J., Villarroel R., De Clercq R., van Montagu M., Rogers J.,
RA Cronin A., Quail M.A., Bray-Allen S., Clark L., Doggett J., Hall S.,
RA Kay M., Lennard N., McLay K., Mayes R., Pettett A., Rajandream M.A.,
RA Lyne M., Benes V., Rechmann S., Borkova D., Bloecker H., Scharfe M.,
RA Grimm M., Loehnert T.-H., Dose S., de Haan M., Maarse A.C., Schaefer M.,
RA Mueller-Auer S., Gabel C., Fuchs M., Fartmann B., Granderath K., Dauner D.,
RA Herzl A., Neumann S., Argiriou A., Vitale D., Liguori R., Piravandi E.,
RA Massenet O., Quigley F., Clabauld G., Muendlein A., Felber R., Schnabl S.,
RA Hiller R., Schmidt W., Lecharny A., Aubourg S., Chefdor F., Cooke R.,
RA Berger C., Monfort A., Casacuberta E., Gibbons T., Weber N., Vandenbol M.,
RA Bargues M., Terol J., Torres A., Perez-Perez A., Purnelle B., Bent E.,
RA Johnson S., Tacon D., Jesse T., Heijnen L., Schwarz S., Scholler P.,
RA Heber S., Francs P., Bielke C., Frishman D., Haase D., Lemcke K.,
RA Mewes H.-W., Stocker S., Zaccaria P., Bevan M., Wilson R.K.,
RA de la Bastide M., Habermann K., Parnell L., Dedhia N., Gnoj L., Schutz K.,
RA Huang E., Spiegel L., Sekhon M., Murray J., Sheet P., Cordes M.,
RA Abu-Threideh J., Stoneking T., Kalicki J., Graves T., Harmon G.,
RA Edwards J., Latreille P., Courtney L., Cloud J., Abbott A., Scott K.,
RA Johnson D., Minx P., Bentley D., Fulton B., Miller N., Greco T., Kemp K.,
RA Kramer J., Fulton L., Mardis E., Dante M., Pepin K., Hillier L.W.,
RA Nelson J., Spieth J., Ryan E., Andrews S., Geisel C., Layman D., Du H.,
RA Ali J., Berghoff A., Jones K., Drone K., Cotton M., Joshu C., Antonoiu B.,
RA Zidanic M., Strong C., Sun H., Lamar B., Yordan C., Ma P., Zhong J.,
RA Preston R., Vil D., Shekher M., Matero A., Shah R., Swaby I.K.,
RA O'Shaughnessy A., Rodriguez M., Hoffman J., Till S., Granat S., Shohdy N.,
RA Hasegawa A., Hameed A., Lodhi M., Johnson A., Chen E., Marra M.A.,
RA Martienssen R., McCombie W.R.;
RT "Sequence and analysis of chromosome 4 of the plant Arabidopsis thaliana.";
RL Nature 402:769-777(1999).
RN [2]
RP GENOME REANNOTATION.
RC STRAIN=cv. Columbia;
RX PubMed=27862469; DOI=10.1111/tpj.13415;
RA Cheng C.Y., Krishnakumar V., Chan A.P., Thibaud-Nissen F., Schobel S.,
RA Town C.D.;
RT "Araport11: a complete reannotation of the Arabidopsis thaliana reference
RT genome.";
RL Plant J. 89:789-804(2017).
RN [3]
RP DOMAIN BTB.
RX PubMed=15749712; DOI=10.1074/jbc.m413247200;
RA Gingerich D.J., Gagne J.M., Salter D.W., Hellmann H., Estelle M., Ma L.,
RA Vierstra R.D.;
RT "Cullins 3a and 3b assemble with members of the broad
RT complex/tramtrack/bric-a-brac (BTB) protein family to form essential
RT ubiquitin-protein ligases (E3s) in Arabidopsis.";
RL J. Biol. Chem. 280:18810-18821(2005).
CC -!- FUNCTION: May act as a substrate-specific adapter of an E3 ubiquitin-
CC protein ligase complex (CUL3-RBX1-BTB) which mediates the
CC ubiquitination and subsequent proteasomal degradation of target
CC proteins. {ECO:0000250}.
CC -!- PATHWAY: Protein modification; protein ubiquitination.
CC -!- DOMAIN: The BTB/POZ domain mediates the interaction with some component
CC of ubiquitin ligase complexes. {ECO:0000269|PubMed:15749712}.
CC -!- SEQUENCE CAUTION:
CC Sequence=AEE81989.1; Type=Erroneous gene model prediction; Evidence={ECO:0000305};
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DR EMBL; AF007269; AAB61041.1; -; Genomic_DNA.
DR EMBL; AL161491; CAB80925.1; -; Genomic_DNA.
DR EMBL; CP002687; AEE81989.1; ALT_SEQ; Genomic_DNA.
DR EMBL; CP002687; ANM66602.1; -; Genomic_DNA.
DR PIR; T01725; T01725.
DR RefSeq; NP_001328487.1; NM_001340303.1.
DR RefSeq; NP_192025.2; NM_116346.3.
DR AlphaFoldDB; O04615; -.
DR SMR; O04615; -.
DR PaxDb; O04615; -.
DR PRIDE; O04615; -.
DR EnsemblPlants; AT4G01160.2; AT4G01160.2; AT4G01160.
DR GeneID; 828156; -.
DR Gramene; AT4G01160.2; AT4G01160.2; AT4G01160.
DR KEGG; ath:AT4G01160; -.
DR Araport; AT4G01160; -.
DR eggNOG; ENOG502QT6M; Eukaryota.
DR HOGENOM; CLU_024600_2_0_1; -.
DR InParanoid; O04615; -.
DR OrthoDB; 462254at2759; -.
DR PhylomeDB; O04615; -.
DR UniPathway; UPA00143; -.
DR PRO; PR:O04615; -.
DR Proteomes; UP000006548; Chromosome 4.
DR ExpressionAtlas; O04615; baseline and differential.
DR GO; GO:0005634; C:nucleus; IBA:GO_Central.
DR GO; GO:0016567; P:protein ubiquitination; IEA:UniProtKB-UniPathway.
DR GO; GO:0010114; P:response to red light; IBA:GO_Central.
DR Gene3D; 3.30.710.10; -; 1.
DR InterPro; IPR011705; BACK.
DR InterPro; IPR000210; BTB/POZ_dom.
DR InterPro; IPR045890; POB1-like.
DR InterPro; IPR011333; SKP1/BTB/POZ_sf.
DR PANTHER; PTHR46336; PTHR46336; 1.
DR Pfam; PF07707; BACK; 1.
DR Pfam; PF00651; BTB; 1.
DR SMART; SM00875; BACK; 1.
DR SMART; SM00225; BTB; 1.
DR SUPFAM; SSF54695; SSF54695; 1.
DR PROSITE; PS50097; BTB; 1.
PE 3: Inferred from homology;
KW Reference proteome; Ubl conjugation pathway.
FT CHAIN 1..527
FT /note="BTB/POZ domain-containing protein At4g01160"
FT /id="PRO_0000406782"
FT DOMAIN 111..180
FT /note="BTB"
FT /evidence="ECO:0000255|PROSITE-ProRule:PRU00037"
FT DOMAIN 233..327
FT /note="BACK"
SQ SEQUENCE 527 AA; 59237 MW; F9A5CB6ECA9B8046 CRC64;
MDLSLSGGDF RFAFNNVNFS DRLLRIEITQ SSGEGEVICS SIVDWARDRK RRREDVTNHT
NDATCHVESD LNKNSCEIVN ENSNNKTQVL VTAAEQEPKS GGEDENERLT NNNTSVLSVQ
ELHISSAILA AKSPFFYKLF SNGMLESEQK QMTLKIDASE ETAVMELLKF MYSNSLSVTA
SSALLDVLMV ADKFEVASCM KYCSQLLLKM PMTLESSLLL LDLPSSLLMA DSVKPLTNAA
RQFIASRYKN MSKITMEELM ALPLVGIEAI LASDGLEIQS EDVVYEVVLK WVKSHYSVLE
ARQEVLGSHL ARYIRFPHMT TDRLKKILTS NDFRPSVASK LVVEALFFKT ESLAHQHVLL
AHEQPASTSR RFAKRAYVHR PIKIVEFAVP RPQCIIYLDL KRKECESIYP SSRISSQQFT
LGGQGFFLSA QCNMDHLCLI HCFGLFIGMQ ENGSASASVT VDYDFSVRSK PTMEFVGKFK
GIYTFTRGKA VGCRNLLGIP WDIFTAKNCP YFINDVLHLR ADLSIRL