Y4179_ARATH
ID Y4179_ARATH Reviewed; 233 AA.
AC O49698; F4JQ18;
DT 10-FEB-2009, integrated into UniProtKB/Swiss-Prot.
DT 25-JAN-2012, sequence version 2.
DT 03-AUG-2022, entry version 87.
DE RecName: Full=UPF0725 protein At4g17990;
GN OrderedLocusNames=At4g17990; ORFNames=T6K21.170;
OS Arabidopsis thaliana (Mouse-ear cress).
OC Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
OC Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae;
OC rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis.
OX NCBI_TaxID=3702;
RN [1]
RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC STRAIN=cv. Columbia;
RX PubMed=10617198; DOI=10.1038/47134;
RA Mayer K.F.X., Schueller C., Wambutt R., Murphy G., Volckaert G., Pohl T.,
RA Duesterhoeft A., Stiekema W., Entian K.-D., Terryn N., Harris B.,
RA Ansorge W., Brandt P., Grivell L.A., Rieger M., Weichselgartner M.,
RA de Simone V., Obermaier B., Mache R., Mueller M., Kreis M., Delseny M.,
RA Puigdomenech P., Watson M., Schmidtheini T., Reichert B., Portetelle D.,
RA Perez-Alonso M., Boutry M., Bancroft I., Vos P., Hoheisel J.,
RA Zimmermann W., Wedler H., Ridley P., Langham S.-A., McCullagh B.,
RA Bilham L., Robben J., van der Schueren J., Grymonprez B., Chuang Y.-J.,
RA Vandenbussche F., Braeken M., Weltjens I., Voet M., Bastiaens I., Aert R.,
RA Defoor E., Weitzenegger T., Bothe G., Ramsperger U., Hilbert H., Braun M.,
RA Holzer E., Brandt A., Peters S., van Staveren M., Dirkse W., Mooijman P.,
RA Klein Lankhorst R., Rose M., Hauf J., Koetter P., Berneiser S., Hempel S.,
RA Feldpausch M., Lamberth S., Van den Daele H., De Keyser A., Buysshaert C.,
RA Gielen J., Villarroel R., De Clercq R., van Montagu M., Rogers J.,
RA Cronin A., Quail M.A., Bray-Allen S., Clark L., Doggett J., Hall S.,
RA Kay M., Lennard N., McLay K., Mayes R., Pettett A., Rajandream M.A.,
RA Lyne M., Benes V., Rechmann S., Borkova D., Bloecker H., Scharfe M.,
RA Grimm M., Loehnert T.-H., Dose S., de Haan M., Maarse A.C., Schaefer M.,
RA Mueller-Auer S., Gabel C., Fuchs M., Fartmann B., Granderath K., Dauner D.,
RA Herzl A., Neumann S., Argiriou A., Vitale D., Liguori R., Piravandi E.,
RA Massenet O., Quigley F., Clabauld G., Muendlein A., Felber R., Schnabl S.,
RA Hiller R., Schmidt W., Lecharny A., Aubourg S., Chefdor F., Cooke R.,
RA Berger C., Monfort A., Casacuberta E., Gibbons T., Weber N., Vandenbol M.,
RA Bargues M., Terol J., Torres A., Perez-Perez A., Purnelle B., Bent E.,
RA Johnson S., Tacon D., Jesse T., Heijnen L., Schwarz S., Scholler P.,
RA Heber S., Francs P., Bielke C., Frishman D., Haase D., Lemcke K.,
RA Mewes H.-W., Stocker S., Zaccaria P., Bevan M., Wilson R.K.,
RA de la Bastide M., Habermann K., Parnell L., Dedhia N., Gnoj L., Schutz K.,
RA Huang E., Spiegel L., Sekhon M., Murray J., Sheet P., Cordes M.,
RA Abu-Threideh J., Stoneking T., Kalicki J., Graves T., Harmon G.,
RA Edwards J., Latreille P., Courtney L., Cloud J., Abbott A., Scott K.,
RA Johnson D., Minx P., Bentley D., Fulton B., Miller N., Greco T., Kemp K.,
RA Kramer J., Fulton L., Mardis E., Dante M., Pepin K., Hillier L.W.,
RA Nelson J., Spieth J., Ryan E., Andrews S., Geisel C., Layman D., Du H.,
RA Ali J., Berghoff A., Jones K., Drone K., Cotton M., Joshu C., Antonoiu B.,
RA Zidanic M., Strong C., Sun H., Lamar B., Yordan C., Ma P., Zhong J.,
RA Preston R., Vil D., Shekher M., Matero A., Shah R., Swaby I.K.,
RA O'Shaughnessy A., Rodriguez M., Hoffman J., Till S., Granat S., Shohdy N.,
RA Hasegawa A., Hameed A., Lodhi M., Johnson A., Chen E., Marra M.A.,
RA Martienssen R., McCombie W.R.;
RT "Sequence and analysis of chromosome 4 of the plant Arabidopsis thaliana.";
RL Nature 402:769-777(1999).
RN [2]
RP GENOME REANNOTATION.
RC STRAIN=cv. Columbia;
RX PubMed=27862469; DOI=10.1111/tpj.13415;
RA Cheng C.Y., Krishnakumar V., Chan A.P., Thibaud-Nissen F., Schobel S.,
RA Town C.D.;
RT "Araport11: a complete reannotation of the Arabidopsis thaliana reference
RT genome.";
RL Plant J. 89:789-804(2017).
CC -!- SIMILARITY: Belongs to the UPF0725 (EMB2204) family. {ECO:0000305}.
CC -!- SEQUENCE CAUTION:
CC Sequence=AEE83975.1; Type=Erroneous gene model prediction; Evidence={ECO:0000305};
CC Sequence=CAA17142.1; Type=Erroneous gene model prediction; Evidence={ECO:0000305};
CC Sequence=CAB78801.1; Type=Erroneous gene model prediction; Evidence={ECO:0000305};
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DR EMBL; AL021889; CAA17142.1; ALT_SEQ; Genomic_DNA.
DR EMBL; AL161547; CAB78801.1; ALT_SEQ; Genomic_DNA.
DR EMBL; CP002687; AEE83975.1; ALT_SEQ; Genomic_DNA.
DR EMBL; CP002687; ANM66644.1; -; Genomic_DNA.
DR PIR; T05085; T05085.
DR RefSeq; NP_001328528.1; NM_001341250.1.
DR RefSeq; NP_193533.5; NM_117909.5.
DR AlphaFoldDB; O49698; -.
DR SMR; O49698; -.
DR PaxDb; O49698; -.
DR PRIDE; O49698; -.
DR EnsemblPlants; AT4G17990.2; AT4G17990.2; AT4G17990.
DR GeneID; 827524; -.
DR Gramene; AT4G17990.2; AT4G17990.2; AT4G17990.
DR KEGG; ath:AT4G17990; -.
DR Araport; AT4G17990; -.
DR HOGENOM; CLU_1542177_0_0_1; -.
DR InParanoid; O49698; -.
DR OMA; KMEHEFM; -.
DR OrthoDB; 1144746at2759; -.
DR PRO; PR:O49698; -.
DR Proteomes; UP000006548; Chromosome 4.
DR ExpressionAtlas; O49698; baseline and differential.
DR Genevisible; O49698; AT.
DR InterPro; IPR006462; MS5.
DR PANTHER; PTHR31260; PTHR31260; 2.
DR Pfam; PF04776; protein_MS5; 1.
PE 3: Inferred from homology;
KW Reference proteome.
FT CHAIN 1..233
FT /note="UPF0725 protein At4g17990"
FT /id="PRO_0000363128"
SQ SEQUENCE 233 AA; 26350 MW; D3DA212576C5BE00 CRC64;
MEDDEKCREF WSRVAESQGF DVEHLMDDKP KSCLLDYQNS DFDTEVFLNA KLGIHKYNML
QGTNLQLSCI EKCNSRITTV CIGYYITLVA KDPSAGGSLV TFQTKVVHED YSKINTLTVY
LARLKSQPPP DEEIGGAKTG LGSSILGTCI HPCKSVSSKS VETEENVKQP NERLKARNAV
FYIRYRYYPN KGRAPKGNGH KPPRDRIAII KRTMDIQGLL TLEFDTRYAK TLL
