Y4216_ARATH
ID Y4216_ARATH Reviewed; 163 AA.
AC Q8L8L9; Q8GWL9; Q9SUG5;
DT 10-AUG-2010, integrated into UniProtKB/Swiss-Prot.
DT 10-AUG-2010, sequence version 2.
DT 03-AUG-2022, entry version 80.
DE RecName: Full=Uncharacterized protein At4g22160;
GN OrderedLocusNames=At4g22160; ORFNames=T10I14.8;
OS Arabidopsis thaliana (Mouse-ear cress).
OC Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
OC Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae;
OC rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis.
OX NCBI_TaxID=3702;
RN [1]
RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC STRAIN=cv. Columbia;
RX PubMed=10617198; DOI=10.1038/47134;
RA Mayer K.F.X., Schueller C., Wambutt R., Murphy G., Volckaert G., Pohl T.,
RA Duesterhoeft A., Stiekema W., Entian K.-D., Terryn N., Harris B.,
RA Ansorge W., Brandt P., Grivell L.A., Rieger M., Weichselgartner M.,
RA de Simone V., Obermaier B., Mache R., Mueller M., Kreis M., Delseny M.,
RA Puigdomenech P., Watson M., Schmidtheini T., Reichert B., Portetelle D.,
RA Perez-Alonso M., Boutry M., Bancroft I., Vos P., Hoheisel J.,
RA Zimmermann W., Wedler H., Ridley P., Langham S.-A., McCullagh B.,
RA Bilham L., Robben J., van der Schueren J., Grymonprez B., Chuang Y.-J.,
RA Vandenbussche F., Braeken M., Weltjens I., Voet M., Bastiaens I., Aert R.,
RA Defoor E., Weitzenegger T., Bothe G., Ramsperger U., Hilbert H., Braun M.,
RA Holzer E., Brandt A., Peters S., van Staveren M., Dirkse W., Mooijman P.,
RA Klein Lankhorst R., Rose M., Hauf J., Koetter P., Berneiser S., Hempel S.,
RA Feldpausch M., Lamberth S., Van den Daele H., De Keyser A., Buysshaert C.,
RA Gielen J., Villarroel R., De Clercq R., van Montagu M., Rogers J.,
RA Cronin A., Quail M.A., Bray-Allen S., Clark L., Doggett J., Hall S.,
RA Kay M., Lennard N., McLay K., Mayes R., Pettett A., Rajandream M.A.,
RA Lyne M., Benes V., Rechmann S., Borkova D., Bloecker H., Scharfe M.,
RA Grimm M., Loehnert T.-H., Dose S., de Haan M., Maarse A.C., Schaefer M.,
RA Mueller-Auer S., Gabel C., Fuchs M., Fartmann B., Granderath K., Dauner D.,
RA Herzl A., Neumann S., Argiriou A., Vitale D., Liguori R., Piravandi E.,
RA Massenet O., Quigley F., Clabauld G., Muendlein A., Felber R., Schnabl S.,
RA Hiller R., Schmidt W., Lecharny A., Aubourg S., Chefdor F., Cooke R.,
RA Berger C., Monfort A., Casacuberta E., Gibbons T., Weber N., Vandenbol M.,
RA Bargues M., Terol J., Torres A., Perez-Perez A., Purnelle B., Bent E.,
RA Johnson S., Tacon D., Jesse T., Heijnen L., Schwarz S., Scholler P.,
RA Heber S., Francs P., Bielke C., Frishman D., Haase D., Lemcke K.,
RA Mewes H.-W., Stocker S., Zaccaria P., Bevan M., Wilson R.K.,
RA de la Bastide M., Habermann K., Parnell L., Dedhia N., Gnoj L., Schutz K.,
RA Huang E., Spiegel L., Sekhon M., Murray J., Sheet P., Cordes M.,
RA Abu-Threideh J., Stoneking T., Kalicki J., Graves T., Harmon G.,
RA Edwards J., Latreille P., Courtney L., Cloud J., Abbott A., Scott K.,
RA Johnson D., Minx P., Bentley D., Fulton B., Miller N., Greco T., Kemp K.,
RA Kramer J., Fulton L., Mardis E., Dante M., Pepin K., Hillier L.W.,
RA Nelson J., Spieth J., Ryan E., Andrews S., Geisel C., Layman D., Du H.,
RA Ali J., Berghoff A., Jones K., Drone K., Cotton M., Joshu C., Antonoiu B.,
RA Zidanic M., Strong C., Sun H., Lamar B., Yordan C., Ma P., Zhong J.,
RA Preston R., Vil D., Shekher M., Matero A., Shah R., Swaby I.K.,
RA O'Shaughnessy A., Rodriguez M., Hoffman J., Till S., Granat S., Shohdy N.,
RA Hasegawa A., Hameed A., Lodhi M., Johnson A., Chen E., Marra M.A.,
RA Martienssen R., McCombie W.R.;
RT "Sequence and analysis of chromosome 4 of the plant Arabidopsis thaliana.";
RL Nature 402:769-777(1999).
RN [2]
RP GENOME REANNOTATION.
RC STRAIN=cv. Columbia;
RX PubMed=27862469; DOI=10.1111/tpj.13415;
RA Cheng C.Y., Krishnakumar V., Chan A.P., Thibaud-Nissen F., Schobel S.,
RA Town C.D.;
RT "Araport11: a complete reannotation of the Arabidopsis thaliana reference
RT genome.";
RL Plant J. 89:789-804(2017).
RN [3]
RP NUCLEOTIDE SEQUENCE [LARGE SCALE MRNA] (ISOFORM 2).
RC STRAIN=cv. Columbia;
RX PubMed=11910074; DOI=10.1126/science.1071006;
RA Seki M., Narusaka M., Kamiya A., Ishida J., Satou M., Sakurai T.,
RA Nakajima M., Enju A., Akiyama K., Oono Y., Muramatsu M., Hayashizaki Y.,
RA Kawai J., Carninci P., Itoh M., Ishii Y., Arakawa T., Shibata K.,
RA Shinagawa A., Shinozaki K.;
RT "Functional annotation of a full-length Arabidopsis cDNA collection.";
RL Science 296:141-145(2002).
RN [4]
RP NUCLEOTIDE SEQUENCE [LARGE SCALE MRNA] (ISOFORM 1).
RC STRAIN=cv. Columbia;
RA Brover V.V., Troukhan M.E., Alexandrov N.A., Lu Y.-P., Flavell R.B.,
RA Feldmann K.A.;
RT "Full-length cDNA from Arabidopsis thaliana.";
RL Submitted (MAR-2002) to the EMBL/GenBank/DDBJ databases.
CC -!- ALTERNATIVE PRODUCTS:
CC Event=Alternative splicing; Named isoforms=2;
CC Name=1;
CC IsoId=Q8L8L9-1; Sequence=Displayed;
CC Name=2;
CC IsoId=Q8L8L9-2; Sequence=VSP_039566;
CC -!- SEQUENCE CAUTION:
CC Sequence=CAB52872.1; Type=Erroneous gene model prediction; Note=The predicted gene At4g22165 has been split into 2 genes: At4g22160 and At4g22165.; Evidence={ECO:0000305};
CC Sequence=CAB79171.1; Type=Erroneous gene model prediction; Note=The predicted gene At4g22165 has been split into 2 genes: At4g22160 and At4g22165.; Evidence={ECO:0000305};
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DR EMBL; AL021712; CAB52872.1; ALT_SEQ; Genomic_DNA.
DR EMBL; AL161556; CAB79171.1; ALT_SEQ; Genomic_DNA.
DR EMBL; CP002687; AEE84565.1; -; Genomic_DNA.
DR EMBL; CP002687; AEE84566.1; -; Genomic_DNA.
DR EMBL; AK118765; BAC43358.1; -; mRNA.
DR EMBL; AY088914; AAM67220.1; -; mRNA.
DR PIR; E85253; E85253.
DR RefSeq; NP_567646.1; NM_118337.3. [Q8L8L9-1]
DR RefSeq; NP_849419.1; NM_179088.2. [Q8L8L9-2]
DR AlphaFoldDB; Q8L8L9; -.
DR SMR; Q8L8L9; -.
DR STRING; 3702.AT4G22160.2; -.
DR PaxDb; Q8L8L9; -.
DR PRIDE; Q8L8L9; -.
DR EnsemblPlants; AT4G22160.1; AT4G22160.1; AT4G22160. [Q8L8L9-2]
DR EnsemblPlants; AT4G22160.2; AT4G22160.2; AT4G22160. [Q8L8L9-1]
DR GeneID; 828305; -.
DR Gramene; AT4G22160.1; AT4G22160.1; AT4G22160. [Q8L8L9-2]
DR Gramene; AT4G22160.2; AT4G22160.2; AT4G22160. [Q8L8L9-1]
DR KEGG; ath:AT4G22160; -.
DR Araport; AT4G22160; -.
DR TAIR; locus:2132011; AT4G22160.
DR eggNOG; ENOG502S5W7; Eukaryota.
DR InParanoid; Q8L8L9; -.
DR OMA; RMEQTEL; -.
DR PhylomeDB; Q8L8L9; -.
DR PRO; PR:Q8L8L9; -.
DR Proteomes; UP000006548; Chromosome 4.
DR ExpressionAtlas; Q8L8L9; baseline and differential.
DR Genevisible; Q8L8L9; AT.
PE 2: Evidence at transcript level;
KW Alternative splicing; Coiled coil; Reference proteome.
FT CHAIN 1..163
FT /note="Uncharacterized protein At4g22160"
FT /id="PRO_0000396015"
FT REGION 1..54
FT /note="Disordered"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT COILED 69..143
FT /evidence="ECO:0000255"
FT COMPBIAS 1..20
FT /note="Polar residues"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT COMPBIAS 34..54
FT /note="Polar residues"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT VAR_SEQ 143..163
FT /note="Missing (in isoform 2)"
FT /evidence="ECO:0000303|PubMed:11910074"
FT /id="VSP_039566"
FT CONFLICT 117
FT /note="V -> I (in Ref. 4; AAM67220)"
FT /evidence="ECO:0000305"
SQ SEQUENCE 163 AA; 18210 MW; 4850F39A465E764E CRC64;
MGKSARLRRS QTSSPENVLL GKDSSDDPYR SDSETESNSS SGTESNMSSD STTSAGVSAM
IRVLSDSLLR TELAEMEMIK AREAARLEAE KRRLEMEVDL TQMVLQTHLQ AMSSLPVGEH
KIYQAQRKRK RSDVEELESS TREKSIALLG LLQLNLIFWN SLT
