Y4289_ARATH
ID Y4289_ARATH Reviewed; 292 AA.
AC Q9SV54;
DT 10-FEB-2009, integrated into UniProtKB/Swiss-Prot.
DT 01-MAY-2000, sequence version 1.
DT 03-AUG-2022, entry version 90.
DE RecName: Full=UPF0725 protein At4g28920;
GN OrderedLocusNames=At4g28920; ORFNames=F25O24.40;
OS Arabidopsis thaliana (Mouse-ear cress).
OC Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
OC Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae;
OC rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis.
OX NCBI_TaxID=3702;
RN [1]
RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC STRAIN=cv. Columbia;
RX PubMed=10617198; DOI=10.1038/47134;
RA Mayer K.F.X., Schueller C., Wambutt R., Murphy G., Volckaert G., Pohl T.,
RA Duesterhoeft A., Stiekema W., Entian K.-D., Terryn N., Harris B.,
RA Ansorge W., Brandt P., Grivell L.A., Rieger M., Weichselgartner M.,
RA de Simone V., Obermaier B., Mache R., Mueller M., Kreis M., Delseny M.,
RA Puigdomenech P., Watson M., Schmidtheini T., Reichert B., Portetelle D.,
RA Perez-Alonso M., Boutry M., Bancroft I., Vos P., Hoheisel J.,
RA Zimmermann W., Wedler H., Ridley P., Langham S.-A., McCullagh B.,
RA Bilham L., Robben J., van der Schueren J., Grymonprez B., Chuang Y.-J.,
RA Vandenbussche F., Braeken M., Weltjens I., Voet M., Bastiaens I., Aert R.,
RA Defoor E., Weitzenegger T., Bothe G., Ramsperger U., Hilbert H., Braun M.,
RA Holzer E., Brandt A., Peters S., van Staveren M., Dirkse W., Mooijman P.,
RA Klein Lankhorst R., Rose M., Hauf J., Koetter P., Berneiser S., Hempel S.,
RA Feldpausch M., Lamberth S., Van den Daele H., De Keyser A., Buysshaert C.,
RA Gielen J., Villarroel R., De Clercq R., van Montagu M., Rogers J.,
RA Cronin A., Quail M.A., Bray-Allen S., Clark L., Doggett J., Hall S.,
RA Kay M., Lennard N., McLay K., Mayes R., Pettett A., Rajandream M.A.,
RA Lyne M., Benes V., Rechmann S., Borkova D., Bloecker H., Scharfe M.,
RA Grimm M., Loehnert T.-H., Dose S., de Haan M., Maarse A.C., Schaefer M.,
RA Mueller-Auer S., Gabel C., Fuchs M., Fartmann B., Granderath K., Dauner D.,
RA Herzl A., Neumann S., Argiriou A., Vitale D., Liguori R., Piravandi E.,
RA Massenet O., Quigley F., Clabauld G., Muendlein A., Felber R., Schnabl S.,
RA Hiller R., Schmidt W., Lecharny A., Aubourg S., Chefdor F., Cooke R.,
RA Berger C., Monfort A., Casacuberta E., Gibbons T., Weber N., Vandenbol M.,
RA Bargues M., Terol J., Torres A., Perez-Perez A., Purnelle B., Bent E.,
RA Johnson S., Tacon D., Jesse T., Heijnen L., Schwarz S., Scholler P.,
RA Heber S., Francs P., Bielke C., Frishman D., Haase D., Lemcke K.,
RA Mewes H.-W., Stocker S., Zaccaria P., Bevan M., Wilson R.K.,
RA de la Bastide M., Habermann K., Parnell L., Dedhia N., Gnoj L., Schutz K.,
RA Huang E., Spiegel L., Sekhon M., Murray J., Sheet P., Cordes M.,
RA Abu-Threideh J., Stoneking T., Kalicki J., Graves T., Harmon G.,
RA Edwards J., Latreille P., Courtney L., Cloud J., Abbott A., Scott K.,
RA Johnson D., Minx P., Bentley D., Fulton B., Miller N., Greco T., Kemp K.,
RA Kramer J., Fulton L., Mardis E., Dante M., Pepin K., Hillier L.W.,
RA Nelson J., Spieth J., Ryan E., Andrews S., Geisel C., Layman D., Du H.,
RA Ali J., Berghoff A., Jones K., Drone K., Cotton M., Joshu C., Antonoiu B.,
RA Zidanic M., Strong C., Sun H., Lamar B., Yordan C., Ma P., Zhong J.,
RA Preston R., Vil D., Shekher M., Matero A., Shah R., Swaby I.K.,
RA O'Shaughnessy A., Rodriguez M., Hoffman J., Till S., Granat S., Shohdy N.,
RA Hasegawa A., Hameed A., Lodhi M., Johnson A., Chen E., Marra M.A.,
RA Martienssen R., McCombie W.R.;
RT "Sequence and analysis of chromosome 4 of the plant Arabidopsis thaliana.";
RL Nature 402:769-777(1999).
RN [2]
RP GENOME REANNOTATION.
RC STRAIN=cv. Columbia;
RX PubMed=27862469; DOI=10.1111/tpj.13415;
RA Cheng C.Y., Krishnakumar V., Chan A.P., Thibaud-Nissen F., Schobel S.,
RA Town C.D.;
RT "Araport11: a complete reannotation of the Arabidopsis thaliana reference
RT genome.";
RL Plant J. 89:789-804(2017).
CC -!- SIMILARITY: Belongs to the UPF0725 (EMB2204) family. {ECO:0000305}.
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DR EMBL; AL078469; CAB43906.1; -; Genomic_DNA.
DR EMBL; AL161573; CAB81480.1; -; Genomic_DNA.
DR EMBL; CP002687; AEE85563.1; -; Genomic_DNA.
DR PIR; T08947; T08947.
DR RefSeq; NP_194621.1; NM_119036.1.
DR AlphaFoldDB; Q9SV54; -.
DR SMR; Q9SV54; -.
DR iPTMnet; Q9SV54; -.
DR PaxDb; Q9SV54; -.
DR PRIDE; Q9SV54; -.
DR EnsemblPlants; AT4G28920.1; AT4G28920.1; AT4G28920.
DR GeneID; 829013; -.
DR Gramene; AT4G28920.1; AT4G28920.1; AT4G28920.
DR KEGG; ath:AT4G28920; -.
DR Araport; AT4G28920; -.
DR TAIR; locus:2123533; AT4G28920.
DR HOGENOM; CLU_053767_2_1_1; -.
DR OMA; WHATRKS; -.
DR OrthoDB; 913161at2759; -.
DR PhylomeDB; Q9SV54; -.
DR PRO; PR:Q9SV54; -.
DR Proteomes; UP000006548; Chromosome 4.
DR ExpressionAtlas; Q9SV54; baseline.
DR InterPro; IPR006462; MS5.
DR PANTHER; PTHR31260; PTHR31260; 1.
DR Pfam; PF04776; protein_MS5; 1.
DR TIGRFAMs; TIGR01572; A_thl_para_3677; 1.
PE 3: Inferred from homology;
KW Reference proteome.
FT CHAIN 1..292
FT /note="UPF0725 protein At4g28920"
FT /id="PRO_0000363123"
FT REGION 1..24
FT /note="Disordered"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
SQ SEQUENCE 292 AA; 33787 MW; 8BCB97DC2FC88696 CRC64;
MSENDSSESD IEMDPEEEKV YRRQVEESDG FDVDYFRYAG IKPCPLKDEN AYTYDIELFG
RLGLHCYNLL HEGTNLKLMC IPKYNTNNIG VSSGDYYYIT LEAIDTYNNS PCTFQTYVSE
WYQTSEHGYL VVETYIARLK GPTGPHNTCI GRGWIWGWEE EAIDVYYKGK LPKWLTKDLL
AAAKDEYYVV QESDILENEW LHLYAEIALY SNWKWHATRK SCEESPHLKL KANNAIFYMG
FKGSGDHHPS GKHVEYQTIV RKAMDGKPGH IRLEVDSWQA IPSDLIGEDE PP
