Y4628_STRCO
ID Y4628_STRCO Reviewed; 269 AA.
AC Q04296; Q04335; Q9F2T4;
DT 01-FEB-1994, integrated into UniProtKB/Swiss-Prot.
DT 02-MAY-2002, sequence version 3.
DT 25-MAY-2022, entry version 123.
DE RecName: Full=Uncharacterized HTH-type transcriptional regulator SCO4628;
GN OrderedLocusNames=SCO4628; ORFNames=SCD39.28;
OS Streptomyces coelicolor (strain ATCC BAA-471 / A3(2) / M145).
OC Bacteria; Actinobacteria; Streptomycetales; Streptomycetaceae;
OC Streptomyces; Streptomyces albidoflavus group.
OX NCBI_TaxID=100226;
RN [1]
RP NUCLEOTIDE SEQUENCE [GENOMIC DNA].
RX PubMed=2770697; DOI=10.1007/bf02464900;
RA Grant S.R., Lee S.C., Kendall K., Cohen S.N.;
RT "Identification and characterization of a locus inhibiting extrachromosomal
RT maintenance of the Streptomyces plasmid SLP1.";
RL Mol. Gen. Genet. 217:324-331(1989).
RN [2]
RP SEQUENCE REVISION.
RA Shiffman D., Cohen S.N.;
RL Submitted (SEP-1993) to the EMBL/GenBank/DDBJ databases.
RN [3]
RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC STRAIN=ATCC BAA-471 / A3(2) / M145;
RX PubMed=12000953; DOI=10.1038/417141a;
RA Bentley S.D., Chater K.F., Cerdeno-Tarraga A.-M., Challis G.L.,
RA Thomson N.R., James K.D., Harris D.E., Quail M.A., Kieser H., Harper D.,
RA Bateman A., Brown S., Chandra G., Chen C.W., Collins M., Cronin A.,
RA Fraser A., Goble A., Hidalgo J., Hornsby T., Howarth S., Huang C.-H.,
RA Kieser T., Larke L., Murphy L.D., Oliver K., O'Neil S., Rabbinowitsch E.,
RA Rajandream M.A., Rutherford K.M., Rutter S., Seeger K., Saunders D.,
RA Sharp S., Squares R., Squares S., Taylor K., Warren T., Wietzorrek A.,
RA Woodward J.R., Barrell B.G., Parkhill J., Hopwood D.A.;
RT "Complete genome sequence of the model actinomycete Streptomyces coelicolor
RT A3(2).";
RL Nature 417:141-147(2002).
CC -!- FUNCTION: The imp locus inhibits the extrachromosomal maintenance of
CC the Streptomyces plasmid SLP1.
CC -!- SEQUENCE CAUTION:
CC Sequence=CAA33875.1; Type=Erroneous initiation; Evidence={ECO:0000305};
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DR EMBL; X15866; CAA33875.1; ALT_INIT; Genomic_DNA.
DR EMBL; AL939120; CAC08281.1; -; Genomic_DNA.
DR PIR; JQ0322; JQ0322.
DR PIR; JQ0323; JQ0323.
DR RefSeq; NP_628790.1; NC_003888.3.
DR RefSeq; WP_011029777.1; NZ_VNID01000028.1.
DR AlphaFoldDB; Q04296; -.
DR SMR; Q04296; -.
DR STRING; 100226.SCO4628; -.
DR PRIDE; Q04296; -.
DR GeneID; 1100068; -.
DR KEGG; sco:SCO4628; -.
DR PATRIC; fig|100226.15.peg.4701; -.
DR eggNOG; COG2188; Bacteria.
DR HOGENOM; CLU_063236_8_1_11; -.
DR OMA; APKWREL; -.
DR PhylomeDB; Q04296; -.
DR Proteomes; UP000001973; Chromosome.
DR GO; GO:0003677; F:DNA binding; IEA:UniProtKB-KW.
DR GO; GO:0003700; F:DNA-binding transcription factor activity; IEA:InterPro.
DR GO; GO:0045892; P:negative regulation of transcription, DNA-templated; IBA:GO_Central.
DR CDD; cd07377; WHTH_GntR; 1.
DR Gene3D; 1.10.10.10; -; 1.
DR Gene3D; 3.40.1410.10; -; 1.
DR InterPro; IPR028978; Chorismate_lyase_/UTRA_dom_sf.
DR InterPro; IPR000524; Tscrpt_reg_HTH_GntR.
DR InterPro; IPR011663; UTRA.
DR InterPro; IPR036388; WH-like_DNA-bd_sf.
DR InterPro; IPR036390; WH_DNA-bd_sf.
DR Pfam; PF00392; GntR; 1.
DR Pfam; PF07702; UTRA; 1.
DR SMART; SM00345; HTH_GNTR; 1.
DR SMART; SM00866; UTRA; 1.
DR SUPFAM; SSF46785; SSF46785; 1.
DR SUPFAM; SSF64288; SSF64288; 1.
DR PROSITE; PS50949; HTH_GNTR; 1.
PE 4: Predicted;
KW DNA-binding; Reference proteome; Transcription; Transcription regulation.
FT CHAIN 1..269
FT /note="Uncharacterized HTH-type transcriptional regulator
FT SCO4628"
FT /id="PRO_0000050704"
FT DOMAIN 5..73
FT /note="HTH gntR-type"
FT /evidence="ECO:0000255|PROSITE-ProRule:PRU00307"
FT DNA_BIND 33..52
FT /note="H-T-H motif"
FT /evidence="ECO:0000255|PROSITE-ProRule:PRU00307"
SQ SEQUENCE 269 AA; 29695 MW; 10341B9BE118E191 CRC64;
MAPKAPKWRE LADRFAEQIR TGDYGPGEQL PQIRDLVEAG EGSKETVHRA YKALETEGLV
AMSRGHGTVV RRKAPLKRLG IGRYDKAKWR DGDEVAFIAD RVASGRSYRR NEQTQTVSRV
KASAAVATAL GLPEGADVYA RARLVKEGTQ PTHTLTSYYR PEHVEGTRIV DPTPGPAGRG
GGFRVLYDAG YEIDHMTEEI FARVPSAEEA QLLQLAPGEW VVELHRTTRT VDGTVVEFAI
GVHAGTRFAW SYDFKVPDSA MTEAEDESK