Y464_SYNE7
ID Y464_SYNE7 Reviewed; 113 AA.
AC Q8GMT0; Q31R23;
DT 10-MAY-2004, integrated into UniProtKB/Swiss-Prot.
DT 10-MAY-2004, sequence version 2.
DT 03-AUG-2022, entry version 88.
DE RecName: Full=Nucleoid-associated protein Synpcc7942_0464 {ECO:0000255|HAMAP-Rule:MF_00274};
GN OrderedLocusNames=Synpcc7942_0464; ORFNames=sek0006;
OS Synechococcus elongatus (strain PCC 7942 / FACHB-805) (Anacystis nidulans
OS R2).
OC Bacteria; Cyanobacteria; Synechococcales; Synechococcaceae; Synechococcus.
OX NCBI_TaxID=1140;
RN [1]
RP NUCLEOTIDE SEQUENCE [GENOMIC DNA].
RA Holtman C.K., Sandoval P., Chen Y., Socias T., Mohler B.J., McMurtry S.,
RA Gonzalez A., Salinas I., Golden S.S., Youderian P.;
RT "Synechococcus elongatus PCC 7942 cosmid 3E9.";
RL Submitted (JUL-2002) to the EMBL/GenBank/DDBJ databases.
RN [2]
RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC STRAIN=PCC 7942 / FACHB-805;
RG US DOE Joint Genome Institute;
RA Copeland A., Lucas S., Lapidus A., Barry K., Detter J.C., Glavina T.,
RA Hammon N., Israni S., Pitluck S., Schmutz J., Larimer F., Land M.,
RA Kyrpides N., Lykidis A., Richardson P.;
RT "Complete sequence of chromosome 1 of Synechococcus elongatus PCC 7942.";
RL Submitted (AUG-2005) to the EMBL/GenBank/DDBJ databases.
CC -!- FUNCTION: Binds to DNA and alters its conformation. May be involved in
CC regulation of gene expression, nucleoid organization and DNA
CC protection. {ECO:0000255|HAMAP-Rule:MF_00274}.
CC -!- SUBUNIT: Homodimer. {ECO:0000255|HAMAP-Rule:MF_00274}.
CC -!- SUBCELLULAR LOCATION: Cytoplasm, nucleoid {ECO:0000255|HAMAP-
CC Rule:MF_00274}.
CC -!- SIMILARITY: Belongs to the YbaB/EbfC family. {ECO:0000255|HAMAP-
CC Rule:MF_00274}.
CC -!- SEQUENCE CAUTION:
CC Sequence=ABB56496.1; Type=Erroneous initiation; Evidence={ECO:0000305};
CC Sequence=CAD55612.1; Type=Erroneous initiation; Evidence={ECO:0000305};
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DR EMBL; X04616; CAD55612.1; ALT_INIT; Genomic_DNA.
DR EMBL; CP000100; ABB56496.1; ALT_INIT; Genomic_DNA.
DR RefSeq; WP_011243366.1; NC_007604.1.
DR AlphaFoldDB; Q8GMT0; -.
DR SMR; Q8GMT0; -.
DR STRING; 1140.Synpcc7942_0464; -.
DR PRIDE; Q8GMT0; -.
DR EnsemblBacteria; ABB56496; ABB56496; Synpcc7942_0464.
DR KEGG; syf:Synpcc7942_0464; -.
DR eggNOG; COG0718; Bacteria.
DR HOGENOM; CLU_140930_0_1_3; -.
DR OrthoDB; 1883809at2; -.
DR BioCyc; SYNEL:SYNPCC7942_0464-MON; -.
DR GO; GO:0043590; C:bacterial nucleoid; IEA:UniProtKB-UniRule.
DR GO; GO:0005737; C:cytoplasm; IEA:UniProtKB-UniRule.
DR GO; GO:0003677; F:DNA binding; IEA:UniProtKB-UniRule.
DR Gene3D; 3.30.1310.10; -; 1.
DR HAMAP; MF_00274; DNA_YbaB_EbfC; 1.
DR InterPro; IPR036894; YbaB-like_sf.
DR InterPro; IPR004401; YbaB/EbfC.
DR PANTHER; PTHR33449; PTHR33449; 1.
DR Pfam; PF02575; YbaB_DNA_bd; 1.
DR PIRSF; PIRSF004555; UCP004555; 1.
DR SUPFAM; SSF82607; SSF82607; 1.
DR TIGRFAMs; TIGR00103; DNA_YbaB_EbfC; 1.
PE 3: Inferred from homology;
KW Cytoplasm; DNA-binding.
FT CHAIN 1..113
FT /note="Nucleoid-associated protein Synpcc7942_0464"
FT /id="PRO_0000170455"
SQ SEQUENCE 113 AA; 11937 MW; 07A3A696131B6FCB CRC64;
MAGKGFGFSL GKMKELADAF KKAQQVQEGA KQVQEDLNNM EIEGQAQGGL VKVWVSGNQE
PLRAEIAPEA LNEGAEVLSE LVAAAMKDAY QKSTAAMKEK MEALTAGLGI PGL