Y474_PYRAB
ID Y474_PYRAB Reviewed; 132 AA.
AC Q9V1F3; G8ZGH8;
DT 28-NOV-2003, integrated into UniProtKB/Swiss-Prot.
DT 01-MAY-2000, sequence version 1.
DT 03-AUG-2022, entry version 92.
DE RecName: Full=UPF0292 protein PYRAB04740 {ECO:0000255|HAMAP-Rule:MF_01095};
GN OrderedLocusNames=PYRAB04740; ORFNames=PAB0315;
OS Pyrococcus abyssi (strain GE5 / Orsay).
OC Archaea; Euryarchaeota; Thermococci; Thermococcales; Thermococcaceae;
OC Pyrococcus.
OX NCBI_TaxID=272844;
RN [1]
RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC STRAIN=GE5 / Orsay;
RX PubMed=12622808; DOI=10.1046/j.1365-2958.2003.03381.x;
RA Cohen G.N., Barbe V., Flament D., Galperin M., Heilig R., Lecompte O.,
RA Poch O., Prieur D., Querellou J., Ripp R., Thierry J.-C., Van der Oost J.,
RA Weissenbach J., Zivanovic Y., Forterre P.;
RT "An integrated analysis of the genome of the hyperthermophilic archaeon
RT Pyrococcus abyssi.";
RL Mol. Microbiol. 47:1495-1512(2003).
RN [2]
RP GENOME REANNOTATION.
RC STRAIN=GE5 / Orsay;
RX PubMed=22057919; DOI=10.1007/s00284-011-0035-x;
RA Gao J., Wang J.;
RT "Re-annotation of two hyperthermophilic archaea Pyrococcus abyssi GE5 and
RT Pyrococcus furiosus DSM 3638.";
RL Curr. Microbiol. 64:118-129(2012).
CC -!- COFACTOR:
CC Name=Mg(2+); Xref=ChEBI:CHEBI:18420;
CC Evidence={ECO:0000255|HAMAP-Rule:MF_01095};
CC Note=Binds two Mg(2+) per subunit. {ECO:0000255|HAMAP-Rule:MF_01095};
CC -!- SIMILARITY: Belongs to the UPF0292 family. {ECO:0000255|HAMAP-
CC Rule:MF_01095}.
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DR EMBL; AJ248284; CAB49396.1; -; Genomic_DNA.
DR EMBL; HE613800; CCE69857.1; -; Genomic_DNA.
DR PIR; E75164; E75164.
DR RefSeq; WP_010867598.1; NC_000868.1.
DR AlphaFoldDB; Q9V1F3; -.
DR SMR; Q9V1F3; -.
DR STRING; 272844.PAB0315; -.
DR EnsemblBacteria; CAB49396; CAB49396; PAB0315.
DR GeneID; 1495370; -.
DR KEGG; pab:PAB0315; -.
DR PATRIC; fig|272844.11.peg.501; -.
DR eggNOG; arCOG01486; Archaea.
DR HOGENOM; CLU_140789_3_0_2; -.
DR OMA; VMILTDF; -.
DR OrthoDB; 99443at2157; -.
DR PhylomeDB; Q9V1F3; -.
DR Proteomes; UP000000810; Chromosome.
DR Proteomes; UP000009139; Chromosome.
DR GO; GO:0046872; F:metal ion binding; IEA:UniProtKB-KW.
DR CDD; cd01027; TOPRIM_RNase_M5_like; 1.
DR HAMAP; MF_01095; UPF0292; 1.
DR InterPro; IPR006171; TOPRIM_domain.
DR InterPro; IPR034141; TOPRIM_RNase_M5-like.
DR InterPro; IPR022972; UPF0292.
DR Pfam; PF01751; Toprim; 1.
DR SMART; SM00493; TOPRIM; 1.
DR PROSITE; PS50880; TOPRIM; 1.
PE 3: Inferred from homology;
KW Magnesium; Metal-binding.
FT CHAIN 1..132
FT /note="UPF0292 protein PYRAB04740"
FT /id="PRO_0000143954"
FT DOMAIN 20..100
FT /note="Toprim"
FT /evidence="ECO:0000255|HAMAP-Rule:MF_01095"
FT BINDING 26
FT /ligand="Mg(2+)"
FT /ligand_id="ChEBI:CHEBI:18420"
FT /ligand_label="1"
FT /ligand_note="catalytic"
FT /evidence="ECO:0000255|HAMAP-Rule:MF_01095"
FT BINDING 69
FT /ligand="Mg(2+)"
FT /ligand_id="ChEBI:CHEBI:18420"
FT /ligand_label="1"
FT /ligand_note="catalytic"
FT /evidence="ECO:0000255|HAMAP-Rule:MF_01095"
FT BINDING 69
FT /ligand="Mg(2+)"
FT /ligand_id="ChEBI:CHEBI:18420"
FT /ligand_label="2"
FT /evidence="ECO:0000255|HAMAP-Rule:MF_01095"
FT BINDING 71
FT /ligand="Mg(2+)"
FT /ligand_id="ChEBI:CHEBI:18420"
FT /ligand_label="2"
FT /evidence="ECO:0000255|HAMAP-Rule:MF_01095"
SQ SEQUENCE 132 AA; 15255 MW; DD3E348D8494C05A CRC64;
MYAENYKIFE AIIDKLREFD GAIIVEGPRD EISLRKLGVR AEIIKLSRLP LAEVALIASQ
YKEVMILTDL DRKGEELAKK LAMYLEGYGC KVDTETRRSL KMIAKKDIKG IEDLYNLYLR
VSLRFWPPEE GI
